Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00193 ATGGGTTGGCTTAGCAAAATTTTTAAAAGCTCCGACGAGAAAATTTCAGAAGGGCATTATCACACGAATTATAGAGATGATACAGATTATTACTTACCATCAACTTCAGGGGATGTCTGGTCAGAGAACGAGAATGAAGATATAGATCGTGCTATAGCATTATCTCTCATAGAAGAAAACCAGAAAGGGAAGAATGTGAATGACTACAAGTTACAATTAGAAGAAGACGAACAACTCGCTAGAGCTCTACAAGAAAGCCTAAATGTTGAGTCTCCTCCCAGATATGGAAATGCAAATATGTATCAACCAGTTCCAGCGTACTTCCCAATGGGATCCAGGATCTGTGCTGGTTGCAATACTGAGATTGGTTATGGACGATATCTAAATTGCTTGAATGCATTCTGGCATCCTGAATGCTTCCGCTGCTGTGCTTGTAATCTACCAATCTCTGATTATGAGTTCTCCACATCTGGGAATTACCCTTACCATAAATCTTGCTATAAGGAAAGCTACCATCCAAAATGTGATGTCTGCAAACACTTTATTCCAACAAACCCTGCTGGTCTTATTGAATATAGGGCACATCCTTTTTGGATCCAGAAATATTGCCCTTCCCATGAACATGACGGTACTCCACGCTGTTGCAGCTGTGAGCGAATGGAGCCACGAGAGACAAGATATTGTGCTCTAAATGATGGCCGGAAGCTCTGCTTAGTGTGTCTGGATTCTGCTATCATGGAAACAAACGAATGCCAGCCCCTTTATAATGATATACAAAAATTTTATGATGGTCTAAATATGAAACTGGAACAGCAAATTCCATTGCTCCTGGTAGAAAGACAAGCACTGAATGAAGCAAGAGAGGGGGAGAAAAATGGTCATTATCACATGCCTGAGACCAGAGGACTCTGCCTTTCTGAGGAACAGACTATCAGCACTATTTTTAGGCGGCCTAGGTTTGGAACAGGAAATCTAGCAGGAGACATGTCAACGGGACCTTACAAACTGACTCGACATTGTGAAGTGACAGCAATTCTTATTTTGTATGGTCTCCCAAGATTGCTTACCGGATCTATCTTAGCTCATGAGATGATGCATGCATGGCTACGACTGAAAGGTTACCGAACTCTCAGTCAAGATGTTGAAGAAGGTATCTGTCAGGTTGTGGCTCACATGTGGTTGGAGGCCGAGCTTTCATCTGCATCAGGCAGCAACTTTGTGTCAGCCCCATCCTCATCTGCATCCTATGCATCTAGAAAAGGTAAAAGACCACAATTTGAGAGGAAACTTGGAGAGTTCTTCAAGCACCAGATTGAATCAGACATTTCCCCCATCTATGGAGATGGATTTAGAGCAGGTCGACAAGCAGTACAGAAGTATGGTCTGGAAAGTACCCTTCACCATCTATGGTTGACTGGGAGCTTTCCATATTAA 1434 0.4254 MGWLSKIFKSSDEKISEGHYHTNYRDDTDYYLPSTSGDVWSENENEDIDRAIALSLIEENQKGKNVNDYKLQLEEDEQLARALQESLNVESPPRYGNANMYQPVPAYFPMGSRICAGCNTEIGYGRYLNCLNAFWHPECFRCCACNLPISDYEFSTSGNYPYHKSCYKESYHPKCDVCKHFIPTNPAGLIEYRAHPFWIQKYCPSHEHDGTPRCCSCERMEPRETRYCALNDGRKLCLVCLDSAIMETNECQPLYNDIQKFYDGLNMKLEQQIPLLLVERQALNEAREGEKNGHYHMPETRGLCLSEEQTISTIFRRPRFGTGNLAGDMSTGPYKLTRHCEVTAILILYGLPRLLTGSILAHEMMHAWLRLKGYRTLSQDVEEGICQVVAHMWLEAELSSASGSNFVSAPSSSASYASRKGKRPQFERKLGEFFKHQIESDISPIYGDGFRAGRQAVQKYGLESTLHHLWLTGSFPY 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00193 477 FunFam Protein DA1-related 1 109 168 - -
Bach12g00193 477 Pfam Protein DA1 264 471 IPR022087 -
Bach12g00193 477 ProSiteProfiles LIM domain profile. 113 173 IPR001781 -
Bach12g00193 477 SMART uim 43 62 IPR003903 -
Bach12g00193 477 SMART uim 74 93 IPR003903 -
Bach12g00193 477 ProSitePatterns LIM zinc-binding domain signature. 115 149 IPR001781 -
Bach12g00193 477 Pfam LIM domain 115 169 IPR001781 -
Bach12g00193 477 Gene3D Cysteine Rich Protein 103 172 - -
Bach12g00193 477 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 107 140 - -
Bach12g00193 477 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 141 195 - -
Bach12g00193 477 CDD LIM_DA1 115 167 - -
Bach12g00193 477 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 74 93 IPR003903 -
Bach12g00193 477 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 43 62 IPR003903 -
Bach12g00193 477 PANTHER PROTEIN DA1-RELATED 2 3 477 IPR045218 -
Bach12g00193 477 Coils Coil 66 86 - -
Bach12g00193 477 SMART lim_4 114 166 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00193 Bach-Chr12 1324985 1328766 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach12g00193 DA1-like 7.4e-97 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00193 - - qsa:O6P43_016130 843.958