Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00180 ATGAAAACTATGGCTGAGCTTGAGAATCCCTCGTCAATGACAGCTTCTGGAGAAGCTACTTTATCGTCCTCTGGTTTCCTTAGTAATCCTGAAGCACTTCCACCACCCAAAAAGAAGCGAAACCTTCCCGGAATGCCAGATCCAGATGCTGAGGTGCTTGCTTTGTCGCCAAAAACACTCTTGGCGAGGAACCGTTTCGTGTGCGAGATCTGTAATAAAGGGTTTCAACGAGACCAGAATTTGCAGCTCCACCGACGAGGTCACAATCTTCCGTGGAAGCTCCGGCAGCGAACGAGCAAGGAAATTCGCAAGAGAGTGTACGTATGCCCCGAGCCTTCCTGCGTCCACCACAACCCTTCTAGGGCGCTTGGTGACCTCACCGGCATAAAGAAGCATTTCTGTAGAAAACACGGCGAAAAGAAATGGAAGTGCGAGCGTTGCTCTAAGAAATATGCTGTACAGTCTGATTGGAAGGCCCATGTAAAGACATGCGGAACGAGAGAGTATAAATGCGACTGCGGCACCTTGTTCTCTAGGAGGGACAGCTTCATTACGCACCAAGCTTTCTGTGATGCTTTGGCAGAGGAGAGTGCGAGGGCCCAAACCCAAACGCAAACCCTAGCCATAGGTGGTGGCTCTACGGGCAGCAAAGTTGCTGTGACTTCTCCGCCGCAGCCTCCACTTACTCCATCTACTTCCGTCGTGTCTCCAGCTTTGTCCATTCAGAGCTCAGAAATCCCGGAAAACCCAGTGAAGAAGTCGCCGCCAACGTGTTCACCGAATACAGTGACGAGCCGCACTTCATCACGTTCGACCAGTGTTTTTGCAAGTGTATTTGCATCTTCAAGTGCAGCAGCAACTTCCCAGTCGTCGTCAGCATCGTCATTCTCCAATCTGATGTCCAGCTTAGCCCGCTCGGAATGTCCCACCTCACTCTCGACAATCTCTGCCGTAGAACCCACGTCCCTTTCTCTCTCCACGTCACTTTATCTATCAAGTAATGACTCTTCTCTCTTCGCGGACCAGCAGGACCGTCGCCAATACGCTGCATCTTCACAACCAGCATTGTCTGCCACTGCATTACTCCAAAAGGCAGCTCAAATGGGCGCTACGACATCCAATGCATCGTTTCTTCAAGGTTTAGGCCTAGCTACAGCATCTTCTTCTGGACAAGATGATAGTACTGCTAAAAACTGGAATAGCCACGTAAAGTTAGAGAACAATTCGCTTGGCCTTGGACTTGGCTCTGTTGGCAATGCGGGTTTTGCAGATATGTCATTTGGGAGCCAGCCCATGACCCGCGATCTTCTTGGTTTAAGCATAGGTGGTACTGCTGGCGGGGCCACCAGGGGTGGTCTTTCTGCTTTGCTTACTTCTTTTGGTGGTGCCTTTGAAGTTGCAGATAAGTCAGAGGGAGAGAGGAGTTCGCCGGCCCAAACATGGGAAGATTCACAACAAAGAAAGCGCAACGAGCCAACCTTGCTCTAGAGTATAATGGTTCATTCCTTCACCCGGGTTTTTTTAGTTACGGGTAAATAAGTGATAATTGGAATTTGCTGTCTTGTTTTACAACCTTGGCATCATTCGAGATGGCAAATCAGGAAAAAAGACGAAGTGTAAAGAGCACTATTAAATTATTTAAAGAGTCTTTTTTTAATTGGTTTTGGGTCTTTAGTAAGTGTGCTGTTGTCTGTTGTAGCGAGGTCAAAGATTTAAAATTGTAGAACAAGAAAATGAGAATGAGTCGTCGGATGTACAGAAACTAGCCTAGTTGATAGTCGTTATTGTTATTAGTCTTGGCAAAAATGTTTGCACAGAAAGAATTGCGATTTGTAATTTGGTAATGTTGC 1850 0.4746 MKTMAELENPSSMTASGEATLSSSGFLSNPEALPPPKKKRNLPGMPDPDAEVLALSPKTLLARNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEIRKRVYVCPEPSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHVKTCGTREYKCDCGTLFSRRDSFITHQAFCDALAEESARAQTQTQTLAIGGGSTGSKVAVTSPPQPPLTPSTSVVSPALSIQSSEIPENPVKKSPPTCSPNTVTSRTSSRSTSVFASVFASSSAAATSQSSSASSFSNLMSSLARSECPTSLSTISAVEPTSLSLSTSLYLSSNDSSLFADQQDRRQYAASSQPALSATALLQKAAQMGATTSNASFLQGLGLATASSSGQDDSTAKNWNSHVKLENNSLGLGLGSVGNAGFADMSFGSQPMTRDLLGLSIGGTAGGATRGGLSALLTSFGGAFEVADKSEGERSSPAQTWEDSQQRKRNEPTLL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00180 495 Gene3D Classic Zinc Finger 119 201 - -
Bach12g00180 495 MobiDBLite consensus disorder prediction 232 267 - -
Bach12g00180 495 MobiDBLite consensus disorder prediction 468 495 - -
Bach12g00180 495 MobiDBLite consensus disorder prediction 1 29 - -
Bach12g00180 495 SMART c2h2final6 142 162 IPR013087 -
Bach12g00180 495 SMART c2h2final6 107 137 IPR013087 -
Bach12g00180 495 SMART c2h2final6 66 88 IPR013087 -
Bach12g00180 495 Pfam Zinc-finger of C2H2 type 66 88 - -
Bach12g00180 495 FunFam protein indeterminate-domain 12-like 45 113 - -
Bach12g00180 495 Gene3D Classic Zinc Finger 46 111 - -
Bach12g00180 495 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Bach12g00180 495 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Bach12g00180 495 MobiDBLite consensus disorder prediction 208 222 - -
Bach12g00180 495 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 465 IPR031140 -
Bach12g00180 495 MobiDBLite consensus disorder prediction 1 48 - -
Bach12g00180 495 MobiDBLite consensus disorder prediction 208 267 - -
Bach12g00180 495 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Bach12g00180 495 SUPERFAMILY beta-beta-alpha zinc fingers 65 162 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00180 Bach-Chr12 1236986 1239717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00180 5 470 IDZ Gene Family AT3G50700 51.540 3.70e-139 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach12g00180 zf-met 0.0036 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00180 K25869 - qsa:O6P43_018833 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00180 12 1236986 1239717 Bach12g00180 12 1236986 1239717 ECH