Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00144 ATGTCCAACTCCATTACGGGTCAGGACCATTTTGAGAACCAAGAATTTGATGCTTATGGGTCTTGTATTAGAAGCAGTAATGCATTTCCCGAAGGCCTTGGAGTATTTCCCAGCATTCATTCAATGGGAGACAGAATGTCACGATCAGTGGAGCTTGTGCAAGCCCCTGCACTAGTAAAGGGCTCTGAGATCAGCCACACTAGACATCTGATGGATCTTCTTGGAGCAGCCAATGAAAAAATTCACCAAACTCAGGGTCTCTCCCTTTCTTTAGGCTCTCACGTGCTTGTCTCCTCTGAGGAATACAGGCAGCGATCCTTAAATCCTGGTCTCATGGGCCCCAATTACTTCATATCTGGAGAGGAGGCAAGAGAATCTTGTAACCCAGGAGTGGATCATTTGACCAGTGACTACTCTTTCGCCAGCAATGCTTTTGCTTCATCTTCTACCACATTAAACCGTTCTGCTTCCACCTCTTATGGAACGGAATCTTTTGCTGCTATCATTGGGAACTCAAGATACTTAAAACCAGTACAATCCCTTCTTGAAGAACTTGTTGATGTTGGTGGAAATGTTGTTGACAGAGTCAATGAAAAATATGTGGGGAAGTTGTTTCATGGGAGTAGAACAGGAGCTCGGAGACTCTCCGCCGAATTAAAAGCAGAGTTGTGCAACAATGGGCCTTTGCTGGCTGAGAAACATGAACTTCAAGTCAAAGTTGCAAAGCTGATTGCCTTGTTGGATGAGGTGGAGGGTAGATACGAGAAATACTATCATCAAATGGAAGAAGTGGTGTCCTCCTTTGAAATGATAGCAGGTGTAGGAGCTGCTAAGTGTTATACTGGTTTAGCACTTCAAGCCATGTCTCGGCATTTCTGCAACTTGAGAGATGCCATTATGTCACAAATAAATGTGGAGAAAAAGAGACTCTTGCAAGATTTACCTAAAATCAATAGGGGACTATCACAACTAAGTTTATTTGACAGAGATAATAGACAAAGTCGAATGTCTCTCCAACAGCTTGGGTTGATCCAGAGTCAGCGGCAAGTGTGGAGACCCATCAGAGGATTGCCAGAAACTTCTGTAGCAATTCTTCGATCATGGCTCTTTGAACACTTTCTCCACCCTTATCCTAATGATTCTGAAAAGTTAATGCTGGCATCCCAGACTGGTTTGACTAAAAACCAAGTCTCAAATTGGTTCATAAATGCTCGGGTACGGCTATGGAAGCCAATGATAGAAGAGATGTACAAAGAAGAGTTTGGAGAGTCTTCAGAAGACTCCAACCCGCCTGCTAATAATAACAACTACTTGGCGAGGGAAGATACCGCAGACACAGATCGAGTGGGGGATTGA 1356 0.4381 MSNSITGQDHFENQEFDAYGSCIRSSNAFPEGLGVFPSIHSMGDRMSRSVELVQAPALVKGSEISHTRHLMDLLGAANEKIHQTQGLSLSLGSHVLVSSEEYRQRSLNPGLMGPNYFISGEEARESCNPGVDHLTSDYSFASNAFASSSTTLNRSASTSYGTESFAAIIGNSRYLKPVQSLLEELVDVGGNVVDRVNEKYVGKLFHGSRTGARRLSAELKAELCNNGPLLAEKHELQVKVAKLIALLDEVEGRYEKYYHQMEEVVSSFEMIAGVGAAKCYTGLALQAMSRHFCNLRDAIMSQINVEKKRLLQDLPKINRGLSQLSLFDRDNRQSRMSLQQLGLIQSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEEFGESSEDSNPPANNNNYLAREDTADTDRVGD 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00144 451 SUPERFAMILY Homeodomain-like 357 418 IPR009057 -
Bach12g00144 451 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 119 429 - -
Bach12g00144 451 Pfam Homeobox KN domain 368 407 IPR008422 GO:0003677|GO:0006355
Bach12g00144 451 Gene3D - 345 426 - -
Bach12g00144 451 CDD homeodomain 351 412 IPR001356 GO:0003677
Bach12g00144 451 MobiDBLite consensus disorder prediction 420 451 - -
Bach12g00144 451 Pfam Associated with HOX 169 300 IPR006563 -
Bach12g00144 451 SMART prehox3 163 301 IPR006563 -
Bach12g00144 451 MobiDBLite consensus disorder prediction 426 440 - -
Bach12g00144 451 ProSiteProfiles 'Homeobox' domain profile. 370 411 IPR001356 GO:0003677
Bach12g00144 451 SMART HOX_1 351 415 IPR001356 GO:0003677
Bach12g00144 451 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00144 Bach-Chr12 999479 1001087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00144 51 426 Homeobox Transcription Factor Family AT1G19700 40.955 5.41e-84 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach12g00144 POX 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00144 - - qsa:O6P43_016216 642.884