Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00143 TTTATCGATTTGCTTCCCACTAGAGTCGTATCCCATCATTCATTTCGGTTTTTTGGCTTCTCTTGCTCTTCAGAACAGGTGATATTACGTGTGGATCTCAACATCAGAATTACGTATGTTTCCTAAAGCTAAGCAGTAAAAGAGATGTCTTGCTGACTGACGCCATTGCCAAAAGGGCTAGAAATTTGCTTCTCAGTTGTAACCGGCGTCTCATCCGGCTAATCTAACATAAGATGTATCCGAACCAGGCTTTTTCTTCTGGGTCCTATGCAGAAATGTTGTCCGGGAGTTCTCTATTACCTCATAACTACGGTGAATCTGTTGGAGGCCAAAATGAGATGAAGTTTATGACAGCAGTAGGTAACACAGTTACTATGCAGTCAATTGATGGGCATTCCAATGGCAATGATCCTTCAACAGGCGACCCGGCTTGCAACTCATTTACTGGTGATTCCCATGTTATTCCTAGGACACGATTAGGACCTGTAGATAATGATCAAAACATACAGTGCCAGGGTTTATCTCTTAGCCTAGGGACACTTGTGCCTTCTACTGTACCTATCCCTCCGTTTCAGTACCAGTACTCCACCACAGGTCTCTCATCGCTGATGACTAATTGTTTTCCAAACTTCAAGGGGACTACATCTCTTGAAGATGATGAGACTGTCCTACATCAGGATTTTAGAAGTGGTAACGTCGCATCTGTATCTTGCGGTGGTTCTCAGAACACTTTAAAAACGGAGGCCTTCTACAATCCCCACTCTTCAGTCTGCCTTAAAGAAGCCTTCTCTGATCCATGTCTGCATGGATCACCAGGTTTCATGAACACTGTCCTAAACTCTCAGTACCTTAAGGCAGCACAGGATCTGCTTCATGAAATAGTTAATGTACTAAAGGCTTTGAAGCAACCTGGATTGGAAAAACATAAGAGTTCCCGTGACATGGGATTGGATGCCTCCAAAGATGCTGGTGGAAGATCTACCAGCCAATCTGTGCAGATGTCTTCAGACCCTAATGCTTCAACTAACAACTCCTCATGTGAACTCTCACCTGCAGAGAGACAGAATTTGTTGGACAAGAAGACAAAACTTTTATCCATGTTAGATGAGGTAGATAAAAGATATAGGCAGTATTGCCATGAGATGCAAATTGTGGTGTCGTCTTTCGCCATGGTTGCTGGGTGTGGTGCAGCTGAACCATATACCGCAGTTGCTTTGCGAACAATTTCTCGCCACTTCCGGTGTTTGCGTGATGCTATCAGTGGGCAAATTCAAGTGACTCAAAGAAAGTTAGGGGAGCAAGAGGGAATACCTCGCCTCCGCTACGTTGACCAGCAGCTCAGACAACAAAAGGCCATTCAGCAACTTGGTGTAATGCGACAAGCTTGGAGGCCTCAGAGGGGACTTCCTGAAAGCTCTGTGTCAATTCTCCGTGCTTGGCTCTTTGAGCACTTCCTCAACCCTTATCCAAAGGATTCGGAGAAAATTATGCTGGCGAGGCAAACAGGCTTGACCAGAAACCAGGTAGCAAACTGGTTCATTAATGCACGGGTGCGTCTTTGGAAGCCAATGGTTGAAGAAATGTACAAAGAAGAGTTTGGTAATTCTGAGATGAGCTGCAATCTTTCATCTGAAATTACACCTAGAACACCAAGAGATGATGTGCAAGTTTCTGATAATAAAGGGGAAGAGTCAGAGGACAACATAATAACTGTTAATGACAGCATCCAAGGAGGGCTGCTTCAAGGGTCAAAGCTGGACCATACTTGCACAGTAGAAATGGATGAGAGGGCTGTAAGGATGGAGATTCAAAGTAGTGGCCATGGAGATAATGTCACAGAATCTGGAAGTATGAAATTGCAGGGCGGGCAAAGGTCCAACATGAACACTGGTTTTCATTCAAGCGGATCCATTCCAACCAACCAGAATTGTGATGGCCATGTTATGGCTCCAAATCCGTCCACATATGATTTATCTGAGTTAGGTGGTTTTCCCGTGGGTGGTCATGTTTCCCTTTCATTGGAGTTGCGGAACTGTGAAAACGATGGATTTGCCATGTCCGATGATGGCATCGATAAAAGACATAATCAGACATTAGCTTCTTCACCTGATAATGATTTACTGGATTATCATTTTTCAGACCAAGGAAAGCAACAAAGGTTTGGCAATCCTCACCTGTTACATGAATTTGTCATCTGA 2198 0.4413 MYPNQAFSSGSYAEMLSGSSLLPHNYGESVGGQNEMKFMTAVGNTVTMQSIDGHSNGNDPSTGDPACNSFTGDSHVIPRTRLGPVDNDQNIQCQGLSLSLGTLVPSTVPIPPFQYQYSTTGLSSLMTNCFPNFKGTTSLEDDETVLHQDFRSGNVASVSCGGSQNTLKTEAFYNPHSSVCLKEAFSDPCLHGSPGFMNTVLNSQYLKAAQDLLHEIVNVLKALKQPGLEKHKSSRDMGLDASKDAGGRSTSQSVQMSSDPNASTNNSSCELSPAERQNLLDKKTKLLSMLDEVDKRYRQYCHEMQIVVSSFAMVAGCGAAEPYTAVALRTISRHFRCLRDAISGQIQVTQRKLGEQEGIPRLRYVDQQLRQQKAIQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLNPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGNSEMSCNLSSEITPRTPRDDVQVSDNKGEESEDNIITVNDSIQGGLLQGSKLDHTCTVEMDERAVRMEIQSSGHGDNVTESGSMKLQGGQRSNMNTGFHSSGSIPTNQNCDGHVMAPNPSTYDLSELGGFPVGGHVSLSLELRNCENDGFAMSDDGIDKRHNQTLASSPDNDLLDYHFSDQGKQQRFGNPHLLHEFVI 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00143 654 ProSiteProfiles 'Homeobox' domain profile. 382 445 IPR001356 GO:0003677
Bach12g00143 654 SMART prehox3 194 344 IPR006563 -
Bach12g00143 654 Gene3D - 382 459 - -
Bach12g00143 654 Pfam Homeobox KN domain 402 441 IPR008422 GO:0003677|GO:0006355
Bach12g00143 654 MobiDBLite consensus disorder prediction 228 242 - -
Bach12g00143 654 Pfam Associated with HOX 200 343 IPR006563 -
Bach12g00143 654 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 156 478 - -
Bach12g00143 654 MobiDBLite consensus disorder prediction 245 272 - -
Bach12g00143 654 SUPERFAMILY Homeodomain-like 386 452 IPR009057 -
Bach12g00143 654 CDD homeodomain 385 446 IPR001356 GO:0003677
Bach12g00143 654 MobiDBLite consensus disorder prediction 463 487 - -
Bach12g00143 654 SMART HOX_1 385 449 IPR001356 GO:0003677
Bach12g00143 654 MobiDBLite consensus disorder prediction 228 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00143 Bach-Chr12 992871 996825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00143 94 467 Homeobox Transcription Factor Family AT1G19700 51.026 9.71e-111 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach12g00143 POX 2.3e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00143 - - gmx:100791641 857.055