Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00125 ATGAAGATCCTGTGCGACGTGTGTGGTAAAGACGAAGCTTTGGTGTTCTGCGCCGCCGACGAGGCAGCCCTCTGTGGTGGCTGCGACTGCCGCGTTCACCATGCCAACAAGCTCGTCTCCAAACACCAACGCTTTTCTCTTCAACGTCCTTGTGTTAAGCGATACCCTCTCTGCGATGTTTGCTTGGAGAGGAGGGCTTTCGTGTTCTGTCAGCAGGATAGAGCGATTCTCTGCGAAGACTGTGACTTGCCGATCCATTCGGCCAACGAGCATACCCAGAAGCATGATCGGTTTCTTCTTACAGGGATTAAGCTCTCGGCTACTGCTATACTTTATTCACCATCAGCCTCCAGTTCCGTTATCACCAATGCCTCTGATTCTATTTATAATCCCGAGTCTCAGTCTTCAGTGAATAACTCTGTTTTTTCTTCTACTGTCATGTCAAATCCACCAATTTGGGTGACCAAAAACTCACCTGCAACAACAGAAATAGCATCTGCATCTACAATTGCATTCCCGACTGTTAACAAGGCTGGAGGAAGCTTGTTAACTACTGAAGGAGTGGATTCCACTAGCAGCATATCGGAGTATTTGATAGAGACTCTTCCGGGTTGGCAGGTTGAAGACCTTTTTGACTCATCTTCTGTTCCGTTAGGTTTATGCAAGAATGACGATATGTTGCCGTTTTTCGATGCCGATATGGAGGGCAATCTGGATTCTTTCTCGCCCGGGAGTAAGGGGATACGGGTTCCTCAAGCACCTTCTCTTCTGTATTCTGCACAAATGGATAGGCAGATTGGGTTTAAAGCCAGCAGATCAAGGTTAAGGGATGATAATTTCATAGTTCCACAGATTAGCCCTTCCTCTATTAGCTCCAAGAGACCCAGACCTCTCTATGGTGAAAACAAGCCTCAAAATTAAATATCGGCAGGAAAACAGTTCTGTATCTTCTCTTTTCCTTTACTCCATCCCTGTATTTGTCTCGAATTTCTGTCTGTTCTTGTTTTGTGCTGTTGATTTGGTTCCACTGAACTGTTTATTTTCTCAACTTACCCTCCCTGCTTCCCTCCAACTGGAATGTGTTTTGAATTCCATCGTTTTGTACGTGCTTGTGTCATTGTAAATATGAACTGTTGTAAAGTTTTCTTTCCCTGTTTTTGTATAATTTTTGCAACAATTTCTAG 1184 0.4451 MKILCDVCGKDEALVFCAADEAALCGGCDCRVHHANKLVSKHQRFSLQRPCVKRYPLCDVCLERRAFVFCQQDRAILCEDCDLPIHSANEHTQKHDRFLLTGIKLSATAILYSPSASSSVITNASDSIYNPESQSSVNNSVFSSTVMSNPPIWVTKNSPATTEIASASTIAFPTVNKAGGSLLTTEGVDSTSSISEYLIETLPGWQVEDLFDSSSVPLGLCKNDDMLPFFDADMEGNLDSFSPGSKGIRVPQAPSLLYSAQMDRQIGFKASRSRLRDDNFIVPQISPSSISSKRPRPLYGENKPQN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00125 306 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bach12g00125 306 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bach12g00125 306 SMART bboxneu5 53 100 IPR000315 GO:0008270
Bach12g00125 306 Pfam B-box zinc finger 54 92 IPR000315 GO:0008270
Bach12g00125 306 CDD Bbox1_BBX-like 57 100 - -
Bach12g00125 306 Gene3D Classic Zinc Finger 1 99 - -
Bach12g00125 306 CDD Bbox1_BBX-like 4 47 - -
Bach12g00125 306 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bach12g00125 306 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 288 - -
Bach12g00125 306 MobiDBLite consensus disorder prediction 284 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00125 Bach-Chr12 875776 877172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00125 1 294 C2C2-CO-like Transcription Factor Family AT1G75540 40.816 1.32e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach12g00125 zf-B_box 7.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00125 - - qsa:O6P43_018639 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02373 3 30151017 30152137 Bach12g00125 12 875776 877172 BWGD
Bach12g00125 12 875776 877172 Bach12g00125 12 875776 877172 ECH