Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00117 ATGGATGATGCTGGGCATCGTGAAAACGGAAGGCACAAAGCTGATCAATATAAATCTGCTCAGGGACAGTGGTTGATGCAACATCAACCATCCATGAAGCAGATCATGGCAATAATGGCTGAAAGAGAAGCAGCCATTCAAGAAAGAAATCTGGCCGTGTCTGAAAAAAAGGCAGCCCTTGCAGAGCGCGACATGGCATTCCTGCAGCGAGATACTGCCATCACAGAACGAAATAATGCTATAATAGAAAGAGATAATGCAATTGCAACCCTTCAGTATCGAGAAAACTCTTTAGCCAGTTGTAGCATGTCTTCATGTCATCCAGGATGTCAAATCTCACGTGGGATAAAGCACGTGCATCATCCTCAGCAACAGGTGCACCATATACCTCACATGGGTGATGCTTCTTACAGCACACGGGAGATGCACACAAGTGATGCACTTCCCCCAGCAACCCTTCCTTCTGAACCCGGGAAGTCACGAAGAGCCAAACGACCAAAGGAGGGTAAATCAATTTCCCCTAATAAGAAGACCTCAAAATCTGCAAGAAAGGTCAAGAAAGAGAGTGAAGACTTAAATAAGATGATGTTTGGTAAGATAGAGTGGAAGAGTAGTCAAGAAATGGCTAATGGAGGTGATGATCTTAACAAGCAGTTAGTGGTTTCAAAGGCTGATTGGAAAGGTCAGGACTTGGGGTTGAACCAAGTAGCATATGATGAGTCAACCATGCCAGCGCCAGTATGCTCTTGCACTGGTGTCATGAGACAGTGCTACAAATGGGGGAATGGGGGTTGGCAGTCTGCTTGTTGCACAACCACCATATCAATGTATCCACTTCCAGCAGTACCCAACAAAAGGCACGCCCGGGTAGGTGGTCGAAAGATGAGTGGAAGTGCTTTCAGTAAGCTGCTTAGCCGACTTGCCGCAGAAGGCCATGATCTGTCAAACCCAGTTGACCTCAAGGAACATTGGGCTAAACATGGCACGAACCGCTATATCACAATTAAGTAG 1011 0.4629 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAEREAAIQERNLAVSEKKAALAERDMAFLQRDTAITERNNAIIERDNAIATLQYRENSLASCSMSSCHPGCQISRGIKHVHHPQQQVHHIPHMGDASYSTREMHTSDALPPATLPSEPGKSRRAKRPKEGKSISPNKKTSKSARKVKKESEDLNKMMFGKIEWKSSQEMANGGDDLNKQLVVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVMRQCYKWGNGGWQSACCTTTISMYPLPAVPNKRHARVGGRKMSGSAFSKLLSRLAAEGHDLSNPVDLKEHWAKHGTNRYITIK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00117 336 MobiDBLite consensus disorder prediction 1 21 - -
Bach12g00117 336 Pfam GAGA binding protein-like family 1 336 IPR010409 -
Bach12g00117 336 PANTHER - 1 336 IPR010409 -
Bach12g00117 336 MobiDBLite consensus disorder prediction 1 15 - -
Bach12g00117 336 MobiDBLite consensus disorder prediction 158 174 - -
Bach12g00117 336 Coils Coil 51 71 - -
Bach12g00117 336 MobiDBLite consensus disorder prediction 136 189 - -
Bach12g00117 336 SMART GAGA_bind_2 1 336 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00117 Bach-Chr12 822728 823870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00117 65 336 BBR or BPC Transcription factor family AT5G42520 65.157 1.53e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bach12g00117 GAGA_bind 5.6e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00117 - - gmx:100783502 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00117 12 822728 823870 Bach12g00117 12 822728 823870 ECH