Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00107 ATGGCTTCCGTCGAAGAAAAGCTTAGAACAGGAGGATTAGTTGTTGGAGGTCAAACTCTTGTTGCAGAGATGAAGCTCTTGAAAGAAATGCAGGATCAATCTGGTGTCCAAAAGAGTATAAATTCCCAGTTATGGCATGCTTGCGCAGGGCCACTTGTGTCCTTACCTCAGGTGGGCAGTCTTGTCTATTACTTCCCTCAGGGACATAGCGAGCAGGTGGCAGCTTCCACAAGAAGAACAGCGACCTCGCAGATTCCTAACTATCCGAATCTTCCATCTCAGTTGCTGTGCCAAGTTCAAAATGTTACACTTCATGCAGACAGAGATACAGACGAAATCTACGCTCAGATGAGTCTCCAACCACTGAATACTGAAAATGACGTGTTTCCTATATCTGAGTTTGGAGTGAAGCCGAGTAAACATCCAAGTGAATTTTTCTGTAAAACTTTGACAGCTAGTGACACGAGCACGCATGGCGGATTTTCAGTACCACGCAGGGCAGCAGAAAAGCTCTTTCCTTTATTGGATTACACAATTCAACCCCCAACTCAAGAGCTTGTTGTCCGAGACTTGCATGATAACACCTGGACATTTCGGCATATTTACCGTGGCCAGCCGAAGAGACACCTTCTCACGACAGGATGGAGTTTGTTTGTAGGCTCAAAAAGGCTTAAAGCAGGTGATTCTGTTCTTTTTATAAGGGATGAGAAGTCGCAATTGTCAGTTGGTGTTAGGCGTGCAAATCGTCAACAGACAACATTGCCATCATCAGTTCTTAGTGCTGATAGCATGCACATTGGTGTGCTTGCTGCTGCAGCTCATGCTGCTGCTAATCGGATCCCATTCACCATTTTCTACAATCCAAGGGCATGTCCTTCAGAATTTGTAATTCCTTTGGTAAAGTACAGAAAAGCTGTATTTGGGACTCAGCTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGATATATGGGTACAATAGTTGGGATCAGTGACTTGGATCCTTTGAGGTGGCCTGGCTCTAAGTGGCGAAATATTCAGGTGGAGTGGGATGAGCCAGGATGTGGCGATAAGCAGACTAGAGTTAGTTCGTGGGAAATTGAGACTCCTGAAAGTCTTTTTATCTTTCCTTCTTTGACTTCAACTTTGAAGCGACCATTACAATCTGGATTTTTGGAAAATGAGTGGGGAACATTGCTAAGAAGACCTTTTATACAAGTTCCAGAAAATGGAAACGTGGAGCTCACCAACTCTCTATCAAATCTCTACTCGGAACACCTAAGGAGTGTTCTTTTTAAATCTCAACTTGGTAAAATTCCTGCTGCAGTTTCATCACTCGTGCAACAAGAAACTGCTGCCAAGAAAGATCCCCTGCAAGATTTGAATGCCACATTGGCAACAGATAACCAAAAACCTCTTGTTGCTTGTTCAGAGGGCATGCCACTAAAAGATCTACATTATTCTCAATCATTGCAAGATCAATCAAACCCCTTGAACCCGCATTCACTGTTGAAAAATGATGAACTCCGAAAAGTGAACCCTCCGCCTTCTGGAACAGTTATTGATAATTCGAGAGTGGAATCCGAGGGTTTAAGTGATCATACGATTGAATTCCCTTCGATGGATGGGTGCAATATGGAAAAAGTTACTACAAATCTTGTAAATCCACAATGTTTGGCGAGCCAGTTGACAACCCAGAATCCATTGCTGTCCCAATCTAGTCCATGGAGCATGCAACCGCCTAAGTTAGAATCATCCATGTCTCAGTCACTAGTTGCGGATGTGGCACACCGATACGATTCTGCCATTGTAAATGGCCTATTCCCTCCCCAGGACTTTGATGAATGGATGTTGAATTCTTCTAGCCAATGTTACTCTGGGATAAACAGATTAACTGTTTCGGCTTTGCAAGAACAGTCTGTGCTTCTACCTCAACTTGTTAATCCTTCTTTACCTTTGACAAACCAAGAAATGTGGGATCATTATCTGAGGAATATCAAGTTATTACCTCAAGCAGACCACCAGCAAGGGCTATATGGCCTTAATCGTATATCTAGTTCAAGCGACTTGAAGGATCTTTCGGTTGAGAGCAATAATCAAAGTGGAGTGTACTCTTGTGTTAATGTGGATGCTAGTAACACCGGAAGTACCATGGTTGATCCTTCTACTTCAAGTACCATTTTAGATGAATTTGCCGCGTTGAAGGATGCTGATTTTCAGAACCCATCAGATTGCATGGTGGGTAACTTGAGTTCGAGTCAGGATGTCCAGTCTCAGATAACTATAGCAAGTTTGGCGGAGTCACATGCCTTTTCTCTGCAAGACTTCCCTGACAACTCAGGTGGAACGTCTTCAAGCCATGTTGATTTTGATGAAGCCACCATTCTGCACAATAACTCATGGCAGCAAGTCCCTGCACCCATGCGAACCTATACCAAGGTTCAAAAGGCAGGATCTGTTGGAAGATCAATTGATGTGACTATTTTTAAAAATTACAAGGAATTGGTCTCTGCAATTGAATGCATGTTTGGTCTTGAGGGTCTGCTCAATGACACCAGAGGTTCGGGATGGAAATTGGTATATGTAGATTACGAGAGCGATGTTCTACTTGTTGGGGACGATCCTTGGGAGGAATTTGTTGGCTGTGTGCGCTGCATCAGAATTTTATCACCCTCAGAGGTTCAGCAGATGAGTGAAGAGGGAATGAAGCTTCTCAACAGTGCTGCGGTGCAAGGGATTAATGGATCAATATCCGGTGGCTGCAGTTGA 2793 0.4375 MASVEEKLRTGGLVVGGQTLVAEMKLLKEMQDQSGVQKSINSQLWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQVQNVTLHADRDTDEIYAQMSLQPLNTENDVFPISEFGVKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPLLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLSVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRIPFTIFYNPRACPSEFVIPLVKYRKAVFGTQLSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNIQVEWDEPGCGDKQTRVSSWEIETPESLFIFPSLTSTLKRPLQSGFLENEWGTLLRRPFIQVPENGNVELTNSLSNLYSEHLRSVLFKSQLGKIPAAVSSLVQQETAAKKDPLQDLNATLATDNQKPLVACSEGMPLKDLHYSQSLQDQSNPLNPHSLLKNDELRKVNPPPSGTVIDNSRVESEGLSDHTIEFPSMDGCNMEKVTTNLVNPQCLASQLTTQNPLLSQSSPWSMQPPKLESSMSQSLVADVAHRYDSAIVNGLFPPQDFDEWMLNSSSQCYSGINRLTVSALQEQSVLLPQLVNPSLPLTNQEMWDHYLRNIKLLPQADHQQGLYGLNRISSSSDLKDLSVESNNQSGVYSCVNVDASNTGSTMVDPSTSSTILDEFAALKDADFQNPSDCMVGNLSSSQDVQSQITIASLAESHAFSLQDFPDNSGGTSSSHVDFDEATILHNNSWQQVPAPMRTYTKVQKAGSVGRSIDVTIFKNYKELVSAIECMFGLEGLLNDTRGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSAAVQGINGSISGGCS 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00107 930 SMART B3_2 146 248 IPR003340 GO:0003677
Bach12g00107 930 FunFam Auxin response factor 813 906 - -
Bach12g00107 930 CDD B3_DNA 145 246 IPR003340 GO:0003677
Bach12g00107 930 MobiDBLite consensus disorder prediction 499 539 - -
Bach12g00107 930 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 907 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach12g00107 930 FunFam Auxin response factor 310 382 - -
Bach12g00107 930 Pfam AUX/IAA family 814 904 IPR033389 -
Bach12g00107 930 Pfam Auxin response factor 272 355 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach12g00107 930 SUPERFAMILY CAD & PB1 domains 817 896 - -
Bach12g00107 930 ProSiteProfiles B3 DNA-binding domain profile. 146 248 IPR003340 GO:0003677
Bach12g00107 930 FunFam Auxin response factor 144 248 - -
Bach12g00107 930 SUPERFAMILY DNA-binding pseudobarrel domain 136 275 IPR015300 -
Bach12g00107 930 Pfam B3 DNA binding domain 146 247 IPR003340 GO:0003677
Bach12g00107 930 Gene3D - 310 382 - -
Bach12g00107 930 Gene3D - 814 906 - -
Bach12g00107 930 Gene3D - 144 247 IPR015300 -
Bach12g00107 930 ProSiteProfiles PB1 domain profile. 817 901 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00107 Bach-Chr12 779180 784047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00107 19 926 B3 DNA Binding Superfamily AT1G19850 58.925 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach12g00107 AUX_IAA 5.4e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00107 K14486 - gmx:100813003 1399.42