Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00086 ATGGCAGGAAATTATAGAATTACAATGAACCAGAAGGATAATGTGAGGTTCTTGACTACAAGTATTGATAGTTTCATTCAAGATCGGTTAATCAACAAAGAACAAAGAATCCAACATAAAGAACAATGTGCAGAGAGATTAGCAGCTGAAGATGGAAGCTGCGATAAAGACAGTGAGGTTCAATACTCCGATCAAGCAGTACTAGCAAATTTAGATTGGGGCATTGAGGCCCTTGAAGAAGCTATCAATACCTTTAATATGGAAACTAAACTTGCTCGACTAGATCATGCTGAGAAGATGTTGCAAGTATGTGCCATGTTGAATCCTAAGCAGAAAACTGCTGGAGTTCCCAACTTCTACCTCTCAGCTTGGGCGCACCTCAATCTATCCTACTTATGGAAGTTGCGGAACAATACCCAGAATTCTATTCTTCACGCTCTTGAGATGTTTATTGTTGATCCTTTTTTCTCACGGGTTGATTTTGCTCCTGAACTCTGGAAAGATCTGTTTCTTCCACACATGAACTCTATTGTAGGGTGGTATTCAGAGCAAAGACACAAGCTTATGATGGAAGTGATACCTGACTCTTCTGATATGTCCTTTTCAACTGATTTTGATAAATTTTTCAACGAATCTTTGGTCTATTCTATGAGGCCGCACCAATTAGAAAAATTGAAAAAGCTGGAGCAGCTTTATGGAGAGTCATTGGATGAGAATACACGACTTTATGCCAAGTACTATAAGGATTGCATCAACTCTGATTCAACCTCAGGCAAGAAGGTAGTTCCAATGTTTCCAATTGCTGAACCTCCAATGACTCCTTTGCATGAGTTGAGCCGCTCTGTTCCTGATTATGTAAAATTTGGTCCTATTTTGCCCAAAAGTGCTGGGTTTTCCCCAATTCTAAGATCTAAAGAAGGTGCAAATGAAACAATCAGAGTGAATATAACTTCTAGCCATTCACACGAGGAGGAGGAGTCATCTAAATGGGGTGCTAAGGAGAGCATCAGTGAAGAGAATGAAGATGATTCAGATTCTGAACTCCATGATGCCTATGTATATTCTGATAACAAGCAAAATATTTTGGCTCTTGGCATGAAGGTGGCCAAGGCTGAGGATATTGAAACAGAAGTATTTCCACCAAACCAGAAAAATCAAATACATTCTCCTACAATCTTCTCTCCCTTGGCTTCTCCAAGAACTCCATCAGTTAATTTGTCTGCAAATACCGATGTGTACAGTGAAAGAGAACCCGATGCCTTTTTGCGCTTGTTTTCTAGTCGTTTTACAGACTCAATTATTTCCACCTCTTTACCATTATCTCCACAAATGAGCACTGATCACAGTATCAGCTCAGAAGACTCTGATAATGAACAGATAGGCATGGAGAATATTAGGAGGAAAAACTATAAAGAAGCACAAAGTGTGAATCACGAAAATGTGAACAGCGCAATACTGAATGACAGTTCCCTTATTGATGAGGGAAATCAGAGGAGCATCCCGTTGCTTAAATCAGAGAAGCCGACTACACGATCAAGACCACCAAAGGATTTTGTTTGCCCTATCACAAGCCAGATATTCTCTGATCCTGTCACCCTTGAGACTGGTCAGACATATGAAAGAAAAGCAATACAAGAATGGCTTAAAACAGGAAACACAACATGCCCCATTACTCGACAACCTCTCTCTGCAACCACATTGCCCAAAACAAATTATGTTTTGAAGAGATTGATAACATCATGGAAAGAACAGCATCCTGAATTGGCTCAGGAGTATTCAAATTCTGACACACCCAGAGGTTCTTTGGGTTCTCCCTCCACAAATGACATCCCTGTGGTCTCTATTTCACATAAAATAGCTGATTTTCCTATTCAAAAGAACACAGATGATTATACTAGCCAAAGGAGCAAAAGATTTATGCAGGTTACTGTCTCAAGATCCCCAACTAGTGTGATATCTCAAGCTGCAGTCGAAACAATCATAAATTGTTTGAAACCCTATGTATCAAGTCTCTGTACATCAGAAAACTTGCAGGAGTGTGAAGAAGCTGTCTTAGCAATTGCTAGATTGTGGAAGGAATCAAAGACGGATCCTCAGATTCATTCTTATTTATCGAAGTCAACCATTATAAGTGGTTTAGTGGAAATAATTTCTGCTTCTATGAATAGAGAAGTTCTTAGAGCATCAATTTATATTCTTTCTGAGTTAAGTTTTGCAGATGAGAGTGTTGGAGAAGCACTTACCAGTGTAGATTCTGATTTTGATTGTTTGGCTACACTGCTTAAGAATGGTTTAGCTGAGGCTGCTGTTCTTATTTACCAACTCAGGCCAGTGTTTGCTCAACTTTCAGCTCATGAACTTATTCCCTCCCTTGTCCAGTTGATCTTGAACAAACATGAAGAATCTGATGATTTTCGGTTATTTATGGAGCCCAAGGATGCTGCAGTAGAAATTCTTGAGCAGATTTTGATTGGGGGGGATGAAAATAGCAGGTCCCTCAATGCTAGGCGTGTTATTTCAGCAAATGGAATACCAGCCTTGGTGAAGTATTTGGATAGAATAGAAGGCAGGAGGTCTGTTGTTTCAGTACTTCTGTGTTGTATGCAAGCTGAAAAAAGTTGCAGGAACTTGGTAGCGAACAGGATTGAATTATCTCCTGTTCTTGAATTATTTCATGCTGGAAACGATAATGTTAGAGGCATATGTGTGGATTTTCTTGCAGAGCTGGTTCAACTGAATAGAAGGACATTCTGCAATCAGATATTACAGATAATCAAGGATGAAGGAGCATTTAGTACCATGCACACCTTTCTTGTCTATCTTCAGATGGCTCCTATGGGGCATCAGCTTGCTGTTGCTAGTCTTCTACTTCAGCTTGATCTCCTGGTTGAGCCACGGAAGATGAGCATTTACAGGGAAGAAGCTGTCGAGGCGCTGATAGAAGCACTTTGGCAAAAAGATTTCTCAAATATTCAAATGAAAGCTTTAGATGCTTTACTATTTCTTACTGGTCATCTCACTTCCTCAGGAAAGTCGTGTACAGAAGCCTGGTTGCTGAAGATTGTAGGATTTGATCAACCTTATAATGCTTTAATGAAGGCTGAGCAGTTGGCAAAACATAACCATGATATGCTGGAAACAATGGAGGGTGAAGAAAAAGCCTTGAACTCCTGGCAGAGGAAGGTAGCTTTTGTGCTTTCCAACCATGAAAAGGGTTCTATATTCAAAGCTTTGGAAGAATGCCTGCGGAGTAATTCCTTAGAGATGGCAAAATCATGCCTTGTAATTGCGACATGGCTTATCCACATGCTCTTCACTCTTCCTGATACTGGTGTTAGGGAAATTGCTCGCAGATCCTTATTTGACGAACTACTAAATGTACTCCAATCATCCAAGAACTTGGAGGAAATGATCCTGGTATCCCTTGCTTTGAAGACCTTTATTAGTGACCCGATTGCACTTGAAGAACTTGGAGCTCATGCCAAAGGCCTCTATAGAACCTTGAGAAACCTGAAGAAGTATTCAGTGGCGGCAAGTGACATAATGAAAGCCTTAGTGAACTTGAAATCTGTTGATGTGACAGAGTTGTGGAGTTGTACTGAAGTGGTTGAGTTAGATTTATCCTCAAATGGTGAAGTACTTTCTTTACTTTATCTGAATGGTCTGGTCGTGAGTGGCCACTCTGATGGAATTATGAAGGTTTGGGATGCTGGGAAGAGAGTTTTAAGATTGCTTCAAGAAAATCATGAACACACAAAGGCTGTAACCTGTCTCTGTTCCTCAGGTGACAAACTGTACAGCGGTTCCTTAGACAAATCCATTCGGGTTTGGACGATGAAATCTGATGAGATTCAGTGTATCCAAGTTCATGAAATTAAAGATCCAGTGTATGAGTTGATAGCCAATGCTAATTTGGCGTGCTACATATCTCAAGGAACTGGTGTTAAGGTGTACAATTGGTCGGAGACTCCAAAGCCTATAAATTTCAACAAATATGTGAAGTGCCTTGCCATGGCTGGGGATAAGTTGTATTGTGGTTGCTCTGGTTACAGTATCCAGGAGGTTGACTTGTCCTCGTATACATCAAACTCATTCCTTACTGGTACGAGAAAATTGCTTGGAAAGCAAAACATACACTCCCTCCAAATTCTTGATGGTTGCTTGTTTTTCGGGGGTTCTTCAGTGGATGCAACTGCAGGCAAGATATTATCGCTATCGACAAAAGCAGTGGTGGGATCACTGTCAACGGGACTTGACATCCACCGCATAGCTATCAACGGTGACTTTATATTTTCGGGCACGAAGTGTGGCACCATTGAGATCTGGGTAAAAGATAAGTTCACCAGAGTTGCCACCATAAAAATGGCCAGTGGTCATACAAAAATTACGTCATTAGTATTGTCTCCAGATGGTGGAATGCTTTTCGTTGGTTCCTCTGATGGCAAGATCCAGGTTTGGGCTTTGGATTAG 4470 0.4065 MAGNYRITMNQKDNVRFLTTSIDSFIQDRLINKEQRIQHKEQCAERLAAEDGSCDKDSEVQYSDQAVLANLDWGIEALEEAINTFNMETKLARLDHAEKMLQVCAMLNPKQKTAGVPNFYLSAWAHLNLSYLWKLRNNTQNSILHALEMFIVDPFFSRVDFAPELWKDLFLPHMNSIVGWYSEQRHKLMMEVIPDSSDMSFSTDFDKFFNESLVYSMRPHQLEKLKKLEQLYGESLDENTRLYAKYYKDCINSDSTSGKKVVPMFPIAEPPMTPLHELSRSVPDYVKFGPILPKSAGFSPILRSKEGANETIRVNITSSHSHEEEESSKWGAKESISEENEDDSDSELHDAYVYSDNKQNILALGMKVAKAEDIETEVFPPNQKNQIHSPTIFSPLASPRTPSVNLSANTDVYSEREPDAFLRLFSSRFTDSIISTSLPLSPQMSTDHSISSEDSDNEQIGMENIRRKNYKEAQSVNHENVNSAILNDSSLIDEGNQRSIPLLKSEKPTTRSRPPKDFVCPITSQIFSDPVTLETGQTYERKAIQEWLKTGNTTCPITRQPLSATTLPKTNYVLKRLITSWKEQHPELAQEYSNSDTPRGSLGSPSTNDIPVVSISHKIADFPIQKNTDDYTSQRSKRFMQVTVSRSPTSVISQAAVETIINCLKPYVSSLCTSENLQECEEAVLAIARLWKESKTDPQIHSYLSKSTIISGLVEIISASMNREVLRASIYILSELSFADESVGEALTSVDSDFDCLATLLKNGLAEAAVLIYQLRPVFAQLSAHELIPSLVQLILNKHEESDDFRLFMEPKDAAVEILEQILIGGDENSRSLNARRVISANGIPALVKYLDRIEGRRSVVSVLLCCMQAEKSCRNLVANRIELSPVLELFHAGNDNVRGICVDFLAELVQLNRRTFCNQILQIIKDEGAFSTMHTFLVYLQMAPMGHQLAVASLLLQLDLLVEPRKMSIYREEAVEALIEALWQKDFSNIQMKALDALLFLTGHLTSSGKSCTEAWLLKIVGFDQPYNALMKAEQLAKHNHDMLETMEGEEKALNSWQRKVAFVLSNHEKGSIFKALEECLRSNSLEMAKSCLVIATWLIHMLFTLPDTGVREIARRSLFDELLNVLQSSKNLEEMILVSLALKTFISDPIALEELGAHAKGLYRTLRNLKKYSVAASDIMKALVNLKSVDVTELWSCTEVVELDLSSNGEVLSLLYLNGLVVSGHSDGIMKVWDAGKRVLRLLQENHEHTKAVTCLCSSGDKLYSGSLDKSIRVWTMKSDEIQCIQVHEIKDPVYELIANANLACYISQGTGVKVYNWSETPKPINFNKYVKCLAMAGDKLYCGCSGYSIQEVDLSSYTSNSFLTGTRKLLGKQNIHSLQILDGCLFFGGSSVDATAGKILSLSTKAVVGSLSTGLDIHRIAINGDFIFSGTKCGTIEIWVKDKFTRVATIKMASGHTKITSLVLSPDGGMLFVGSSDGKIQVWALD 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00086 1489 Pfam U-box domain 515 585 IPR003613 GO:0004842|GO:0016567
Bach12g00086 1489 ProSiteProfiles U-box domain profile. 513 588 IPR003613 GO:0004842|GO:0016567
Bach12g00086 1489 MobiDBLite consensus disorder prediction 317 337 - -
Bach12g00086 1489 MobiDBLite consensus disorder prediction 588 607 - -
Bach12g00086 1489 SMART WD40_4 1407 1443 IPR001680 GO:0005515
Bach12g00086 1489 SMART WD40_4 1241 1278 IPR001680 GO:0005515
Bach12g00086 1489 SMART WD40_4 1200 1236 IPR001680 GO:0005515
Bach12g00086 1489 SMART WD40_4 1446 1487 IPR001680 GO:0005515
Bach12g00086 1489 SMART Ubox_2 517 581 IPR003613 GO:0004842|GO:0016567
Bach12g00086 1489 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 3 1488 - -
Bach12g00086 1489 Gene3D - 1390 1489 IPR015943 GO:0005515
Bach12g00086 1489 Gene3D - 642 1016 IPR011989 -
Bach12g00086 1489 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1455 1489 - -
Bach12g00086 1489 CDD RING-Ubox_PUB 515 567 IPR045210 -
Bach12g00086 1489 Pfam WD domain, G-beta repeat 1247 1277 IPR001680 GO:0005515
Bach12g00086 1489 Pfam WD domain, G-beta repeat 1457 1486 IPR001680 GO:0005515
Bach12g00086 1489 ProSiteProfiles Trp-Asp (WD) repeats profile. 1248 1283 IPR001680 GO:0005515
Bach12g00086 1489 MobiDBLite consensus disorder prediction 316 346 - -
Bach12g00086 1489 SUPERFAMILY WD40 repeat-like 1220 1488 IPR036322 GO:0005515
Bach12g00086 1489 SUPERFAMILY ARM repeat 655 1005 IPR016024 -
Bach12g00086 1489 Gene3D - 1193 1389 IPR015943 GO:0005515
Bach12g00086 1489 ProSiteProfiles Trp-Asp (WD) repeats profile. 1455 1489 IPR001680 GO:0005515
Bach12g00086 1489 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 498 596 IPR013083 -
Bach12g00086 1489 SUPERFAMILY RING/U-box 505 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00086 Bach-Chr12 634853 641338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00086 504 872 U-box Gene Family AT1G23030 26.562 2.78e-20 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00086 - - gmx:100776142 2226.05