Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00065 ATGGGAGTGGCACAGAAGACTGTTGATATGGAGGAGGGGACACTTGAGATCGGCATGGAATATAGAACTGTCTCTGGTGTTGCCGGTCCACTAGTTATTCTCGACAAGGTTAAGGGACCGAAGTTTCAGGAAATTGTTAATATTCGCTTGGGAGATGGAACAACCCGACGAGGCCAAGTTTTGGAAGTAGATGGAGAGAAAGCTGTAGTGCAGGTTAACTTTTCTGCTGCTATTGGTCCTTCTTATGGGTTTTTGAAGGAACATCAGGAATTGACAATAAATTCACCACTGTGCAGTTCACAGGCGAGATTGGGAATTTCCTCACATATGCAGGTTCTGAAAACACCTGTGTCGTTGGATATGCTTGGTCGCATATTTAATGGCTCTGGCAAACCCATTGACAATGGTCCTCCAATTCTACCTGAAGCATACCTGGATATTTCAGGAAGCTCCATCAACCCTAGTGAGAGAACGTATCCTGAAGAGATGATACAGACTGGTATTTCTACAATTGATGTGATGAACTCCATTGCTCGTGGACAGAAGATTCCCCTTTTTTCTGCTGCTGGTCTTCCTCATAATGAAATAGCTGCACAGATTTGTCGTCAGGCTGGTCTAGTAAAGCGATTGGAAAAGTCTGAAAGTCTCATTGATGGTGGGGAAGAGGACAATTTTGCCATCGTATTTGCAGCTATGGGTGTGAACATGGAGACAGCCCAGTTCTTCAAGCGTGATTTTGAGGAGAATGGATCAATGGAGAGAGTGACCCTATTCCTGAACCTGGCAAATGATCCCACCATCGAACGGATTATTACTCCTCGAATTGCCCTTACAACTGCAGAGTACCTGGCCTATGAATGTGGTAAACATGTTCTGGTTATATTGACAGATATGAGCTCTTATGCAGATGCCCTTCGTGAGGTCTCTGCTGCCCGAGAGGAAGTTCCTGGAAGGCGTGGATACCCTGGTTATATGTACACTGATCTTGCAACAATTTATGAGCGCGCTGGACGTATTGAAGGGCGAAAAGGTTCCATCACACAGATCCCAATATTAACCATGCCTAATGATGATATCACTCATCCAACTCCTGATCTCACGGGTTATATTACAGAGGGTCAGATATATATCGATAGGCAGCTACACAATAGACAGAGTGCTATTGGTGACGGGATGACTCGGCGAGATCATGCAGATGTATCAAACCAGCTGTATGCAAATTATGCGATTGGAAAAGATGTTCAGGCAATGAAAGCTGTTGTAGGAGAAGAGGCACTTTCTTCTGAGGATCTGCTTTATCTGGAGTTCCTTGATAAATTTGAAAGAAAATTTGTGACTCAAGGAGCTTATGATACACGGAACATCTTCCAGTCACTTGATCTGGCGTGGACACTTCTCCGTATTTTCCCTCGTGAGCTTTTGCACCGAATCCCAGCCAAAACATTGGATCGGTACTACAGTCGTGACGCGGCGAACTGA 1479 0.4483 MGVAQKTVDMEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVNFSAAIGPSYGFLKEHQELTINSPLCSSQARLGISSHMQVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSESLIDGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQSAIGDGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDRYYSRDAAN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00065 492 NCBIfam V-type ATPase subunit B 20 491 IPR005723 GO:0033180|GO:0046961|GO:1902600
Bach12g00065 492 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 167 385 IPR000194 GO:0005524
Bach12g00065 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 385 IPR027417 -
Bach12g00065 492 CDD ATP-synt_V_A-type_beta_C 391 485 - -
Bach12g00065 492 Gene3D - 16 487 - -
Bach12g00065 492 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 5 490 IPR022879 -
Bach12g00065 492 CDD ATP-synt_V_A-type_beta_N 20 72 - -
Bach12g00065 492 CDD V_A-ATPase_B 112 385 - -
Bach12g00065 492 Hamap V-type ATP synthase beta chain [atpB]. 18 490 IPR022879 -
Bach12g00065 492 Pfam ATP synthase alpha/beta family, beta-barrel domain 24 72 IPR004100 GO:0046034|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00065 Bach-Chr12 467905 472220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00065 1 492 Primary Pumps ATPases(2) AT4G38510 85.433 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00065 K02147 - sspl:121749683 847.81