Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00063 ATGGGAATGGCGTTCATTAAGGGGTTGTGCTACGGTACCGAAACCCATGAAATTCCCATTGCCTCCACAGATTCCTCCCCCAACACTTCTGGTATCCAACTAAAGCCCAGCGAAAGCCAGTATGAGTTCAAACCAAGTCGTCCTCCCAAGCCTACTCAATCTTCCCATATAGGGCCAGTTCTAGGAAAACCCTTCATTGACATAAAATTGATTTACAATATTGAAAAAGAATTGGGAAGAGGGCAGTCTGGGGTGACTTATCTATGTATTGAGAAGGCGACAGGAAGGAAGTATGCATGCAAGTCGATAGCAAGGGGGACGCTGGTGAAAAAGGAAGACATTGAAGACGTTAGAAGAGAAGTAGAGATTCTGCAGCATCTTTCAGGGCAACCAAATATTGTGGAATTCAGGGGCGCTTATGAGGATCGGCAGAACGTGCACTTGGTGACGGAGTTGTGTAGCGGCGGCGAGCTCTTCGACCTTATCATTGCCAAAGGGACTTACTCGGAGCGTCAAGCAGCTACACTCTTCAGGCAGATCGTGAATGTTGTTCATGTTTGCCATTTCATGGGTGTAATGCATCGTGACCTTAATCCTCGGAGTTTCTTGTTGGCCAGCAAGGACTCCAATGCTGCCATTAAAGTTACGGATTTTGGACTCTCCGTCTTCATTCAGCCAGGTAAAGTATACAGGGACGTAATTGGAAGTGCCTACTATGTTGCTCCAGAAGTTCTAAGAAAAAATTATGGAAAAGAGATAGATGTCTGGAGTGCGGGGGTAATTTTATACATCCTCCTATGTGGGGTGCCTCCGTTTTGGGCTGAGACCGAAAAAGGCATATTTGAAGCTATTTTGGAAGGCAAGTATGATTTGAAAAGCCCACCATGGCCTACTATTTCAGATTCTGCAAAGGATCTGATCAGGAAAATGCTGACTTATGACCCTAAGAAACGCATTACAGCATCTGAAGCTCTTGACCACCCATGGATGAAGGAAGGTGGTGAAGCATCTGACAAGCCTACAGACAGTGCCGTGCTTAAAAGAATGAAGCAATTTAGGGCAATGAACAAGATGAAGAAGCTTGCTCTGAAGATAATAGCAGAGAGCCTTTCAGCAGAAGAAATCGAGGGCTTGAAACAAACATTCAACAGTATGGACACAGATGGCAGTGGTACTATCACGTTTGAAGAACTCAAAGCTGGATTGTCCCGACTGGGATCTAAGCTTAGTGAAAATGAAATAAAGCAGCTGATGGAAGCAGCTGATTTTGACAGGAGTGGGTCTATTGATTATATCGAATTCATTACTGCAACTATGCACCGGCATAGACTTGAGAGGGAAGAGAACTTGTATAAAGCTTTCCAATACTTCGACAAGGATAACAGCGGTTTTATAACAAGAGATGAGCTTCGACAAGCTATGACTGAATATGGAATGGGTGATGAAGCTACCATAGACGAAGTCATCAATGATGTTGATACTGACAGAGATGGCAGAATTAGTTACGAAGAGTTTGTGGCCATGATGAGAAAGGGGATGCATGATGGTGATGAGAAACAGAAATGA 1566 0.4419 MGMAFIKGLCYGTETHEIPIASTDSSPNTSGIQLKPSESQYEFKPSRPPKPTQSSHIGPVLGKPFIDIKLIYNIEKELGRGQSGVTYLCIEKATGRKYACKSIARGTLVKKEDIEDVRREVEILQHLSGQPNIVEFRGAYEDRQNVHLVTELCSGGELFDLIIAKGTYSERQAATLFRQIVNVVHVCHFMGVMHRDLNPRSFLLASKDSNAAIKVTDFGLSVFIQPGKVYRDVIGSAYYVAPEVLRKNYGKEIDVWSAGVILYILLCGVPPFWAETEKGIFEAILEGKYDLKSPPWPTISDSAKDLIRKMLTYDPKKRITASEALDHPWMKEGGEASDKPTDSAVLKRMKQFRAMNKMKKLALKIIAESLSAEEIEGLKQTFNSMDTDGSGTITFEELKAGLSRLGSKLSENEIKQLMEAADFDRSGSIDYIEFITATMHRHRLEREENLYKAFQYFDKDNSGFITRDELRQAMTEYGMGDEATIDEVINDVDTDRDGRISYEEFVAMMRKGMHDGDEKQK 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00063 521 Pfam Protein kinase domain 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00063 521 SMART efh_1 484 512 IPR002048 GO:0005509
Bach12g00063 521 SMART efh_1 413 441 IPR002048 GO:0005509
Bach12g00063 521 SMART efh_1 377 405 IPR002048 GO:0005509
Bach12g00063 521 SMART efh_1 449 477 IPR002048 GO:0005509
Bach12g00063 521 FunFam Calcium-dependent protein kinase 1 338 513 - -
Bach12g00063 521 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Bach12g00063 521 Pfam EF-hand domain pair 377 438 IPR002048 GO:0005509
Bach12g00063 521 Pfam EF-hand domain pair 447 510 IPR002048 GO:0005509
Bach12g00063 521 CDD STKc_CAMK 72 329 - -
Bach12g00063 521 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
Bach12g00063 521 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Bach12g00063 521 ProSitePatterns Protein kinases ATP-binding region signature. 78 111 IPR017441 GO:0005524
Bach12g00063 521 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Bach12g00063 521 FunFam Calcium-dependent protein kinase 1 74 157 - -
Bach12g00063 521 PANTHER SERINE/THREONINE-PROTEIN KINASE 65 505 - -
Bach12g00063 521 FunFam calcium-dependent protein kinase 1 158 337 - -
Bach12g00063 521 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Bach12g00063 521 MobiDBLite consensus disorder prediction 20 53 - -
Bach12g00063 521 SUPERFAMILY EF-hand 370 510 IPR011992 -
Bach12g00063 521 Gene3D Phosphorylase Kinase; domain 1 74 157 - -
Bach12g00063 521 Gene3D - 338 517 - -
Bach12g00063 521 ProSiteProfiles Protein kinase domain profile. 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00063 521 MobiDBLite consensus disorder prediction 20 56 - -
Bach12g00063 521 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Bach12g00063 521 Gene3D Transferase(Phosphotransferase) domain 1 158 337 - -
Bach12g00063 521 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Bach12g00063 521 SUPERFAMILY Protein kinase-like (PK-like) 72 337 IPR011009 -
Bach12g00063 521 ProSiteProfiles EF-hand calcium-binding domain profile. 481 515 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00063 Bach-Chr12 455070 459693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00063 49 512 EF-hand Containing Proteins AT3G20410 71.336 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bach12g00063 Pkinase 7.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00063 K13412 - qsa:O6P43_018724 784.252