Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00052 ATGCCGCTGAACTTGGCGGGAGCAGCTGCTGGCTCCCTGCTCTTGTGTGTCAGTGTTTCATTCTTTGCAATTACTGGGGCTGAAGATCCTTACAGATTCTTCAACTGGAATGTTACTTATGGAGACATTTATCCACTTGGAGTTCGCCAAAGGGGAATACTAATCAACGGCCAATTCCCAGGTCCAGACATTCACTCTGTTACCAATGACAATCTCATTATCAATGTCTTCAACAGCTTGGATGAGCCCTTTCTCCTTTCCTGGAGTGGAGTGCAACAGAGGAGGAATTCATACGAAGATGGTGTATTCGGAACAACATGCCCCATCCCACCAGGGAGGAATTTCACTTACATTCTTCAAGTGAAGGATCAGATCGGAAGTTTTTATTACTTCCCATCTCTTGCATTCCACAAAGCAGCTGGCGGTTTTGGAGGCATTAGGATACTTAGCAGGCCAAGAATCCCCGTCCCTTTCCCGGATCCCGCCGGCGATTACACAGTTCTTATTGGAGACTGGTACAAGTCCAACCACACGACTTTGAAAGCCCACCTTGATAGAGGTAAGAAGTTACCATTTCCTGATGGAATCCTCATCAACGGTCGTGGACCTAACGGAGCATCCTTGAATGTCGAACAAGGAAAGACTTACAGGCTTCGAATATCAAATGTGGGGTTGGAGCATTCTCTCAACTTCCGCATCCAAAACCACAAATTGAAGCTGGTTGAAGTGGAAGGAACACACACCCTTCAAACTACCTACTCCTCATTGGACGTTCATGTTGGTCAATCTTATTCAGTTCTTGTAACCGCAGATCAGCCTGCTCAGGACTACTACATTGTGGTTTCCTCGCGATTCACCTCAAAGGTCCTCACCACCACTGGAGTTCTTCATTATAGCAACTCTGCAGGTCGAGTTTCAGGTCCACCCCCTGGTGGACCTACCATTCAAATCGACTGGTCCCTCAATCAGGCTCGTTCTATCAGGACTAACCTCACCGCAAGTGGACCAAGGCCTAATCCACAAGGCTCCTACCATTACGGTCTCATTAACACAACCAAGACCATCATACTGGCGAGTTCAGCTGGGCAAGTGAATCGCAAGCAAAGATACGCAATTAACAGCGTGTCTTACATTGCCCCAGATACTCCTCTTAAGCTCGCCGACTTTTTCAAAATTTCAGGCGTTTTCCGTGGGGGAAGCATATCTGACAGACCCACTGGTGGTGGCATATACCTTGACACATCCGTAATGCAGGCTGACTATAGAGCATTTGTTGAGATTATTTTCCAAAATGACGAGGACATTGTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTGGTTGGTATGGATGGAGGACATTGGACAACATCTAGTAGGAACTCATACAATCTCCGAGATGCAATCGCACGTTGCACCACTCAGGTATATCCTAAGTCTTGGACTGCCATTTATGTTGCACTTGACAATGCAGGAATGTGGAACTTGAGGTCCGAATTTTGGGCACGACAATATCTTGGGCAACAGTTCTACTTGCGCGTTTATACAACAACAAGCTCACTCAGAGATGAGTTCCCAATCCCAAAGAATGCACTTCTTTGTGGTAGGGCAAAGGGGAGACACACACGACCCCTTTGA 1641 0.4674 MPLNLAGAAAGSLLLCVSVSFFAITGAEDPYRFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWSGVQQRRNSYEDGVFGTTCPIPPGRNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTTLKAHLDRGKKLPFPDGILINGRGPNGASLNVEQGKTYRLRISNVGLEHSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVVSSRFTSKVLTTTGVLHYSNSAGRVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILASSAGQVNRKQRYAINSVSYIAPDTPLKLADFFKISGVFRGGSISDRPTGGGIYLDTSVMQADYRAFVEIIFQNDEDIVQSYHLDGYSFFVVGMDGGHWTTSSRNSYNLRDAIARCTTQVYPKSWTAIYVALDNAGMWNLRSEFWARQYLGQQFYLRVYTTTSSLRDEFPIPKNALLCGRAKGRHTRPL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00052 546 FunFam Monocopper oxidase-like protein 162 336 - -
Bach12g00052 546 Pfam Multicopper oxidase 38 151 IPR011707 GO:0005507
Bach12g00052 546 CDD CuRO_2_AAO_like_1 163 298 IPR034271 -
Bach12g00052 546 CDD CuRO_1_AAO_like_1 33 148 IPR034273 GO:0005507
Bach12g00052 546 PANTHER MULTI-COPPER OXIDASE 50 511 IPR045087 -
Bach12g00052 546 SUPERFAMILY Cupredoxins 27 178 IPR008972 -
Bach12g00052 546 CDD CuRO_3_AAO_like_1 380 500 IPR034275 GO:0005507
Bach12g00052 546 FunFam Monocopper oxidase-like protein 348 545 - -
Bach12g00052 546 SUPERFAMILY Cupredoxins 348 537 IPR008972 -
Bach12g00052 546 SUPERFAMILY Cupredoxins 158 338 IPR008972 -
Bach12g00052 546 FunFam L-ascorbate oxidase homolog 31 152 - -
Bach12g00052 546 Gene3D - 162 337 IPR008972 -
Bach12g00052 546 Pfam Multicopper oxidase 382 518 IPR011706 GO:0005507|GO:0016491
Bach12g00052 546 Gene3D - 31 152 IPR008972 -
Bach12g00052 546 Pfam Multicopper oxidase 164 300 IPR001117 -
Bach12g00052 546 Gene3D - 347 543 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00052 Bach-Chr12 373182 378052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00052 - - gmx:100815570 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02458 3 30706521 30711885 Bach12g00052 12 373182 378052 BWGD
Bach12g00052 12 373182 378052 Bach12g00052 12 373182 378052 ECH