Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00050 CCGCGATACACAGATCTCAGTGGCGTAATCCTCCCGTTATTCCTTTTCTACTACCTTGTTTCTGCTCCCCCTCCCTCCCTCCTACCATTTATTTTATTTTTTCTTCAGAAGCATTGGTAAGGGCAACTTCCACCGCTCAACTTAAGCTACCTGGTATATTTTTGGTGGCATCGGTTCTGGGAACTCCATTGTCGAAGATTTTGTGGCGGACCTGATAAATGGCTGGCCAATGCTCAAATGAAGGTCCCAGTACGAGCAATGTTTCTGCAGAATTTTCTGATTCAACTGTTCAGCTCAACATCAAGACTTTAGACTCCAGGATTTACAGTTTTCAAGTGGATAAAAATATGCCAGTGTCATTGTTCAAGGAGAAAATCGCGAATGAAATTGGTGTTCCAGTTAGTCAGCAACGGTTGATTTTCAGGGGAAAAGTCTTAAAGGATGATCATGTTATATCTGAATATCATATTGAGAATGGGCATACATTGCATTTAGTTGAAAGACAACCAAATCAGTTGCAAGGTACTAGCTCTAGTGAGACAACTGGTACTTATGGTAATCGAGGCAATGATGCAAGCTCTGGGGCTCCACGTAATCGTGTTGGGCAAATTTCACACAGTGTTGTTCTTGGGACCTTTAATGTTGGGGAGCAAGGTGAAAGCATTGCTTCAGACCTTACTCGGGTTATTGGGGCAGTTTTGAATTCTATTGGAATTGGCGGTCAGAGTACAAATAGTATTGCTTCTGCTATGCAATCTTCTTCTTCACCAAATCTATCTGGTCAGGCACCTCTGGGGAATGAAGCAGGAAATCAAGCACAGTCTGGACAGACATTTCCCAGTTCATTCCAATCTTTGCCTCAAGTTGTTCAGATTCCTCTGGCTGCTGGAGCTACTATACCTGTTCCTTCACTCAATGCTCCAATTCCTGACTCATTACACACCCTAACTGAATTTATAAATCGCATGGAGCAGACACTATCACAAAATGGCTATCTACCAAATTTGTCTTCAAATGACACTGGAGAGCAACCACCAGTGGAATTATCTTCCAATGTGCAAGGGTTGCCCACGCCTGAAGCGTTAAGCATTGTCTTGCGTCATTCAGAAAGGCTGCTTAGTGGTCATGCTATTGCCGCGCTATCTCATATTGCAGGACGCTTGGAGAGAGAGGGGACAACTTCTGACCCAGGTCTAAGGGGCCAAATACAGTCAGAGTCAATGCAAATAGGACTTATTGTGCAGCATTTGGGTGCACTTCTACTTGAGCTTGGCCGTACAATTTTGACATTGCGTATGGGACAGTCTGCTGCAGAATCTGTTGTTAATGCTGGGCCAGCAATCTATATTTCTCCATCAGGGCCTAATCCTATAATGGTGCAGCCTTTTCCACAGACTAGCTCCCTATTTGGTGGTTCTGTTTCTCCTTCAACTCCTGCGACATTTGGTGCCATTGGTGTTGGTGGTGCCCCTAGGAACATAAACATCCACATACATGCTGGAACTGCTCTCGCACCAATTGTTTCTGCAATTGGTTCAAGGCCAACCAATGGGGAAGGGACACAAAATGAACACCATAATGGTTCTGGATCTGGTGATTCAGGGTCAACACGGGTATTACCTGTTAGAAATGTCATCACTGCAGCTGTGCCATTACGCCCTCCTGGTGTTGCTGTGGCCAGTGGCTCACAATCTGGCATTGGTGTTTCTACTTCACAGCATCCAGATTCAGTTTCATTACAATCTGTTTTAGCTGAAGTCAGCTCCCGCATTAGAAACTTGGCTGGGAATCTGCAAGGAGATAACACAGTTCTGTCAGGTCAAGTGGGGTCAACTAACCAGGACTTGTCTGTTAATGCTGAACACCAACCTGCTTCTGGGAATGAACTAGATACTATGGATATGAATAGTATTGGAGCTGCCCCTGTGTCTTCAGTTAGGTTCACGTCTGAAAGCAGAGCAGATGAGCCCCAACTTGAGGCAGTTCAAACCTGCAACAATGGGGATAGAGATGCCTCGAGCAACAATTTTATTTCTGCTTCTTCTGATGGGGATTTTGTCAGTAGTTTGAGTGGAGAAACAGTATCAAAGTCAGAAAACGTACGAGAAATCGCTTCATCTGTAGGGGAGAGACAAGATCTAAATGAAGGTGCCAAAGCTGCTCCACTTGGATTGGGTGTGACTGGCTTGGATCGTAAGAGGCGACCTAGACCTCAGCCTCCAGTAAGTAAGGGAGCTGATGGTGGTTCAACAAGTTCTGTTGATCAAAATCAACAAGCTGGAGTAGGTGGTCAACATATATTGCAAGCTCTTGCAAGTCATGGATCTGCAGTGAACCAGAGAAATGCTGAGGGACCATCCCAAGGATCCTCTGCCTCTGGAGTTTCACAGCAAACTGGAGTTGGCTCGCCAGATGTCTTGAGAAATATCTTGCAGCAGTTCACGCAGAGCCCCCAGATGATGAATACAGTTAATCACATTGTCCAGCAGGTTGGCAGTCAGGATGTGGGAAATGTTTTTACTGGAACGGATAGAGGGCCAGGTGGTGGGATTGACTTGTCAAGGATGATTCAGCAGATGATGCCCATTGTATCTCAAGCTCTTGGCAATATAACCCCTTCTCAGTCATTTTCTGCTGCAGAACCAGAGTCTCAGGCCCCATACAGAGATGCTAGATTGAGCAGAGTTGATAGTTCTGATAATCAAAACTTACAGATAAACCTTCAACCAGTGGTAGAGATGATTGAGCGCCCGAGCCCCCCTGCTGTTGTTCTACGCGCCGTGGCTGAAAATGCTGTCCAGCTTTCTGGCCGAGGAAGTGCTTCTAATGCTCTTCTGGAAGAGTTATGCTGTGATGACGGCCTTGCTAGTGAATATGTGGAGATGTTACGACGTGATTTAAGTCAGCGAGTTAAGGGTGAATCTGGGTTGGATAAGTGTTAATTCCAGCTGTGTGGATAGTTAATTAATCTCTGCCTCTTTGCTGTGAACATTTTAAGAATGTCTTTGTGAAGGGTTTGGACATCCCTAATTCTTAGTTGATATGGATGATTTGGGAGGACTTCCAGATCATTTCGGTTGAAAATTAGTACAACACCCGATAGTCTTTTCATATGTAAAGATCAAATATTGCGGCGTTCCTAGACAAGACTCTACTTTCCTTTTGTTTTTTCCTACTGTAAAATCCTTAAGCGTAATTCTGTTAGTATTCAGTCTATA 3218 0.4466 MAGQCSNEGPSTSNVSAEFSDSTVQLNIKTLDSRIYSFQVDKNMPVSLFKEKIANEIGVPVSQQRLIFRGKVLKDDHVISEYHIENGHTLHLVERQPNQLQGTSSSETTGTYGNRGNDASSGAPRNRVGQISHSVVLGTFNVGEQGESIASDLTRVIGAVLNSIGIGGQSTNSIASAMQSSSSPNLSGQAPLGNEAGNQAQSGQTFPSSFQSLPQVVQIPLAAGATIPVPSLNAPIPDSLHTLTEFINRMEQTLSQNGYLPNLSSNDTGEQPPVELSSNVQGLPTPEALSIVLRHSERLLSGHAIAALSHIAGRLEREGTTSDPGLRGQIQSESMQIGLIVQHLGALLLELGRTILTLRMGQSAAESVVNAGPAIYISPSGPNPIMVQPFPQTSSLFGGSVSPSTPATFGAIGVGGAPRNINIHIHAGTALAPIVSAIGSRPTNGEGTQNEHHNGSGSGDSGSTRVLPVRNVITAAVPLRPPGVAVASGSQSGIGVSTSQHPDSVSLQSVLAEVSSRIRNLAGNLQGDNTVLSGQVGSTNQDLSVNAEHQPASGNELDTMDMNSIGAAPVSSVRFTSESRADEPQLEAVQTCNNGDRDASSNNFISASSDGDFVSSLSGETVSKSENVREIASSVGERQDLNEGAKAAPLGLGVTGLDRKRRPRPQPPVSKGADGGSTSSVDQNQQAGVGGQHILQALASHGSAVNQRNAEGPSQGSSASGVSQQTGVGSPDVLRNILQQFTQSPQMMNTVNHIVQQVGSQDVGNVFTGTDRGPGGGIDLSRMIQQMMPIVSQALGNITPSQSFSAAEPESQAPYRDARLSRVDSSDNQNLQINLQPVVEMIERPSPPAVVLRAVAENAVQLSGRGSASNALLEELCCDDGLASEYVEMLRRDLSQRVKGESGLDKC 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00050 907 MobiDBLite consensus disorder prediction 702 729 - -
Bach12g00050 907 PRINTS Ubiquitin signature 76 97 IPR019956 -
Bach12g00050 907 PRINTS Ubiquitin signature 55 75 IPR019956 -
Bach12g00050 907 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 9 906 - -
Bach12g00050 907 MobiDBLite consensus disorder prediction 441 465 - -
Bach12g00050 907 MobiDBLite consensus disorder prediction 592 685 - -
Bach12g00050 907 Gene3D - 12 108 - -
Bach12g00050 907 SMART ubq_7 24 95 IPR000626 GO:0005515
Bach12g00050 907 MobiDBLite consensus disorder prediction 175 207 - -
Bach12g00050 907 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Bach12g00050 907 MobiDBLite consensus disorder prediction 257 281 - -
Bach12g00050 907 CDD Ubl_ubiquitin_like 26 93 - -
Bach12g00050 907 SUPERFAMILY Ubiquitin-like 19 98 IPR029071 -
Bach12g00050 907 FunFam Large proline-rich protein BAG6 16 109 - -
Bach12g00050 907 MobiDBLite consensus disorder prediction 438 465 - -
Bach12g00050 907 MobiDBLite consensus disorder prediction 94 126 - -
Bach12g00050 907 MobiDBLite consensus disorder prediction 592 632 - -
Bach12g00050 907 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00050 Bach-Chr12 359732 368780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00050 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 6.41e-11 59.3