Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00049 ATGGAAAAGAAATTGCTAAGCAAAAGTGAAGAGGGACCTATTCGATGCAAAGCGGCGGTTTGTCACAAACCAGGTGAGCCACTCGTCATTGAGGAGATCGTGGTAGCGCCGCCAATGTCTCGAGAAGTTCGGATTCGTATTATATGCACATCTCTCTGTCACAGCGATATTACTTTTTGGAAGATGAAGGACCCTCCTGGAATTTTCCCAAGAATCTTGGGCCACGAAGCAATTGGGGTTGTGGAAAGTATAGGAGAAGATGTAACTGAAGTGAATAAAGGAGATACAGTGATCCCTATTTTCTTACCAGATTGTGGGGAGTGTTTCGATTGCAAATCAAAGAAGAGCAACCTTTGTTCAAACTTCCCCTTCAAGGTATCTCCTTGGATGCCTAGGCATGCCACCAGCAGATTCACCAACTTAAAAGGAGAGGTCATGTACCATTTCTTGTTCGTATCAAGTTTTAGTGAGTACACTGTGGTTGATGTTTCCAATCTAACAAAGATCGATCCCGTAATTCCTCCCAACAGGGCATGCCTCCTCAGTTGTGGTGTATCAACTGGGGTAGGTGCTGCTTGGAGAACAGCAAATGTGGAAGCAGGTTCTACTGTTGCTATTTTTGGTTTGGGCTCTATAGGATTAGCAGTTGCTGAGGGAGCCAGACTTTGTGGAGCAAGTAGAATTATAGGTGTCGATGTCAACCCAGAAAAATTTGAAATTGGGAAAAAGTTTGGACTCACAGATTTTGTCCATGCTGGAGAATGCGAGAACAAATCTGTGAGCCAGGTTATCATTGAGATGACTGGTAGGGGAGCAGATTATTGCTTTGAGTGTGTTGGAATGGCATCATTGGTTCATGAAGCATTCGCTTCTTGTCGAAAGGGTTGGGGAAAAACAATAGTCATGGGAGTAGACAAGCCAGGGTCCCGGTTGAACCTAAGCTCTAGTGAGGTTCTTCATGCTGGGAAAACTCTCATGGGATCCTTATTTGGAGGACTGAAGCCCAAATCTGATATCCCCATTCTCATTAAACGTTACGTGGACAAGGAACTGCAATTGGATGAGTTTGTAACACATGAGGTGAAGTTTAAGGACATCAACAAAGCTTTTGATTTGCTGATTGAAGGAAAGTGTCTTCGATGTGTGATTTGGATGGACAATTGA 1164 0.4381 MEKKLLSKSEEGPIRCKAAVCHKPGEPLVIEEIVVAPPMSREVRIRIICTSLCHSDITFWKMKDPPGIFPRILGHEAIGVVESIGEDVTEVNKGDTVIPIFLPDCGECFDCKSKKSNLCSNFPFKVSPWMPRHATSRFTNLKGEVMYHFLFVSSFSEYTVVDVSNLTKIDPVIPPNRACLLSCGVSTGVGAAWRTANVEAGSTVAIFGLGSIGLAVAEGARLCGASRIIGVDVNPEKFEIGKKFGLTDFVHAGECENKSVSQVIIEMTGRGADYCFECVGMASLVHEAFASCRKGWGKTIVMGVDKPGSRLNLSSSEVLHAGKTLMGSLFGGLKPKSDIPILIKRYVDKELQLDEFVTHEVKFKDINKAFDLLIEGKCLRCVIWMDN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00049 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 348 IPR036291 -
Bach12g00049 387 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Bach12g00049 387 Pfam Zinc-binding dehydrogenase 212 337 IPR013149 -
Bach12g00049 387 FunFam Alcohol dehydrogenase 6 19 200 - -
Bach12g00049 387 Gene3D - 19 380 - -
Bach12g00049 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Bach12g00049 387 SUPERFAMILY GroES-like 336 384 IPR011032 -
Bach12g00049 387 Gene3D - 188 328 - -
Bach12g00049 387 SUPERFAMILY GroES-like 12 198 IPR011032 -
Bach12g00049 387 PANTHER ALCOHOL DEHYDROGENASE 13 383 - -
Bach12g00049 387 FunFam S-(hydroxymethyl)glutathione dehydrogenase 188 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00049 Bach-Chr12 356430 358861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00049 41 186 Monolignol Biosynthesis Gene Families AT4G37970 29.730 4.34e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00049 K00121 - gmx:100806887 679.863