Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00043 TCTCTCTCTCTCTCTCTCACACACACACAGAGACAAACACGCATGGGTGTGGTCTGTGCTCGGGCTCAATAGTCAAAGAATGATTTGGCTTGGTGGTGACTTGTGGCATTAACCTTAATCCCTTTGGTTTACTCCTCTTTTCTTTTTGTTCCCTCTCCCACTTGCTTCAGAGGATTCATATTTTCATGGTGTATGGTTGATGCCAATTGCTGGTGGGTTCCGGCGAATTGAGTCAACCATCAAGTAATGGGCTGTTGCAAATCATCCCTTTCCAAAGGCTCTACTCCCCAAAACAATCATCATTACCTGAACAACATCCCTGCTTTTTCGTCCAACGGCGCCGATACCGGCGCTGCCACCTCCGCCGGAGACGTCCCGGCTTTCTCCGAGTTCCGTCTCGATGACCTTAAAGTCGCCACCAATAACTTCAGCCCTGATAACATCGTCTCCGAGAGCGGAGAAAAAGCACCCAATGTGGTTTACAAGGGTCGCCTCCAGAACCGCGACAGTTGTTGGATTGCCGTCAAGAAATTTACTAAATTGGCCTGGCCCGACTCAAAGCAGTTCGCTGATGAAGCTCGGGGAGTTGGGAAATTAAGACACCCAAGGCTTGCTAATTTGATCGGTTATTGCTGTGATGGCGATGAGAGACTTATTGTTGCCGAGTACATGCCCAATGACACACTTGCCAAACATCTATTCCACTGGGAGAATCAGACAATCGAGTGGGCCATGCGGTTAAGAGTTGCCCTATCCATTGCTGAATCATTAGATTATTGTAATACTGAAGGCCGTCCATTGTACCATGACTTGAATGCTTACAGAGTTCTGTTTGATGAGAATGGCAATCCTCGGCTCTCATGCTTTGGGTTGATGAAGAATAGTAGGGATGGGAAAAGTTATAGTACAAATCTTGCTTATACACCTCCTGAGTATCTAAGAAATGGGAGGGTGACTCCGGAAAGTGTCATCTTCAGCTTTGGGACTGTGTTATTGGATCTTCTAAGTGGCAAGCATATCCCTCCTAGTCATGCCCTTGACATGATAAGGGGGAAAAACATCCTTCTCCTTATGGATTCACATTTGGAGGGAAATTTTTCTACCGAAGAGGCAACCGTGGTTCTTGATCTTGCGTCAATATGTTTGCAGTATGAACCTAGGGAGCGGCCCAAGACCAGGGACCTTGTTACAACACTTTCTCCATTACAAAACAAACCTGATATTCCATCGCATGTAATGCTCGGAATTCCGAAGAATGAAGAAGCACCTCCTACTCCGCAGCATCCTCATTCTCCAATGGGTGATGCTTGTTCTCGAATGGACCTTACAGCTATCCATCAGATTTTGGTGATGACACACTACAGAGATGACGAAGGGACTAACGAGTTGTCGTTCCAAGAATGGACCCAGCAAATGAGAGATATGTTGGAGGCAAGAAAGCGTGGTGACTTGGCGTTCCGTGACAAGGATTTTAAAACAGCAATTGACTGTTATTCCCAGTTTATTGATGTCGGAACCATGGTCTCCCCGACTGTCTATGCGCGTAGAAGTCTGTGCCATCTCCTCTGCGATCAACCAGATGCTGCTCTGCGAGATGCAATGCAAGCACAGTGCGTCTATCCAGACTGGTCCACAGCATTTTACATGCAGGCAGTAGCTCTTTCCAAATTAAACATGCATAAGGATGCAGCTGACATGCTAAATGAGGCTGCTGCTTTAGAAGAGAAAAGGCAACGGAGTGGTAAAGGGTCTTGA 1755 0.4672 MGCCKSSLSKGSTPQNNHHYLNNIPAFSSNGADTGAATSAGDVPAFSEFRLDDLKVATNNFSPDNIVSESGEKAPNVVYKGRLQNRDSCWIAVKKFTKLAWPDSKQFADEARGVGKLRHPRLANLIGYCCDGDERLIVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALSIAESLDYCNTEGRPLYHDLNAYRVLFDENGNPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILLLMDSHLEGNFSTEEATVVLDLASICLQYEPRERPKTRDLVTTLSPLQNKPDIPSHVMLGIPKNEEAPPTPQHPHSPMGDACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAIDCYSQFIDVGTMVSPTVYARRSLCHLLCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALSKLNMHKDAADMLNEAAALEEKRQRSGKGS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00043 502 Pfam Protein tyrosine and serine/threonine kinase 77 317 IPR001245 GO:0004672|GO:0006468
Bach12g00043 502 Coils Coil 474 494 - -
Bach12g00043 502 FunFam probable serine/threonine-protein kinase At4g35230 391 500 - -
Bach12g00043 502 ProSiteProfiles Protein kinase domain profile. 64 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00043 502 Gene3D Phosphorylase Kinase; domain 1 37 141 - -
Bach12g00043 502 Gene3D Tetratricopeptide repeat domain 391 501 IPR011990 GO:0005515
Bach12g00043 502 Gene3D Transferase(Phosphotransferase) domain 1 143 334 - -
Bach12g00043 502 SUPERFAMILY Protein kinase-like (PK-like) 45 326 IPR011009 -
Bach12g00043 502 FunFam probable serine/threonine-protein kinase At4g35230 36 141 - -
Bach12g00043 502 FunFam probable serine/threonine-protein kinase At5g41260 143 334 - -
Bach12g00043 502 SUPERFAMILY TPR-like 396 493 IPR011990 GO:0005515
Bach12g00043 502 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 27 497 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00043 Bach-Chr12 326893 331176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00043 45 344 Glycoside Hydrolase AT3G07070 33.333 1.30e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bach12g00043 PK_Tyr_Ser-Thr 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00043 K14500 - cave:132190020 882.093