Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00030 ATGGGAGATGGCGCTGTGTCGCCTGGTACCTTGCTGGAAGCTCCACCTGTGTCGTCCATGGATTTCGATTACATGGATGAACTTTTCTTAGATGGATGCTGGTTGGAGGGATCTGATTTCCTGCTGCAAAGTCCTTCTACTTGCAATCCCCTATTTGACCCTTCATTTACATTCTCTTGGCCTGTCTTGGAAACAAATGGGGTTTTAAGCGTAAGCTCATCTCACGCTGGAAATCATGAACAAAGGCAAAGGCCCTTGGTTAATGAATCCCAGGAAACTCCTATCAATACTCAACCGATTAGCCAAGACATAATTAATATTGAAGGAAGCTGTAGTCAGTCTGAATTTCATTCGGCTCAAAGTTCTGAAGTGGTCAGAGGATGGTGGATTCGACCCACACCCACGTTAGATCCTGGTCCTGCATCTTTTGCAATGGAGAGACTAATTAGGGCACTTGAGTATATCAAAGATCTCAGTAGAGACAAAGATGTGCTCGTACAAATATGGGTGCCGGTTAATAGAGGTGATAGGCAGATTCTAACAACTAATCACCTTCCTTTCTCGCTTGGAAGCACCCGTCTAAATCTTGCAAAATACAGAGAAATCTCTGAGACATATCAGTTTTCAGCTGAGGATGGCTCTAAGGGGTTGGTGGCAGGATTGCCAGGTCGAGTATTTTGGGGGAAGGTTCCTGAGTGGACTCCTGATGTTCGATTTTTCAGAAGTGATGAATACCCACGAGTTGACCATGCTCAAGAGTACGATGTGCGTGGAACTTTAGCTCTCCCTGTCTTTGAGCAAGGGAGCAGGAGTTGCTTGGGTGTTATTGAAGTTGTCATGACTACCCAGCAGATCAAGTATCGTTCCCAACTTGAAAGTGTCTGCAAAGCACTTGAGGCTGTTGATCTTAGAAGTTCTGAACTTTCAAGTATTCAGAATGTGAAGGAGGCATGCAACAAGTCCTATGAAGTTGCATTACCCGAGATCCAGGAGGTATTAAGATCTGCATGTGAAAAGCACAAATTACCTTTAGCTCAAACCTGGGTCCCATGCATCCAACAAAGCAAAGAGGGCTGCCGGCATTCAAATGATAATTATTTACATTGTATTTCTCCCGTGGATCATGCTTGCCACATTGGTGATCCCAGTGTACAGGCTTTTCATGAGGCTTGCTCTGAGCATCACTTGTTAAAAGGTCAAGGCGTTGCCGGAGGAGCTTTTATGACAAATCAGCCATGCTTCTCAACTGACATAACCTCCATGGGCAAGACAGAGTATCCACTGTCTCACCATGCAAGGATGTTCGGATTGCGGGCTGCTGTTGCTATACGATTGCGAAGCATCCATTGTAGTAGAGATGATTTCGTCCTAGAGTTTTTCATGCCCCCGGATTGCGTTGATGGTGAAGAACAGAAGAAGATGCTTGCTTCATTGTCCATTATTATACAACAGGGTTGCCATAGCTTACGGGTCATAACCAATAACGAATTAGAGGAGGAGATTAGGTTATCAGTTGATGAAGTAATTGTACCTGCAGCTAGTGTATCTGCTAGGACTGCAAGTTGGGTGGATCTCCAACGGAGTGGGACGGCTGCCTCATTGCGCACTGTAGAAAAATCTAGTGAAACAATAGGAAGAAAATTTTCTGACATAAGTCAGCAACGACAAGACCCTACTGTTGATGAGAGTAGCTTGTCAAGTGTAGGTATAAGTAAAACGGGGGAAAAAAGACGGACTAAAGCAGAGAAAACTATCACCCTGCAAGTTCTTCGGCAATATTTTCCTGGAAGCCTAAAAGACGCTGCAAAAAATATTGGCGTTTGTACGACAACTCTGAAAAGAATCTGCCGGAAACATGGTATAAAGCGTTGGCCCTCTCGAAAGATCAAAAAGGTGGGTCACTCCTTACAAAAACTTCAACTTGTAATCGATTCAGTTCAAGCTGGCTCTGGTGCCTTCCAAATAGATTCGTTCTATTCAAACTTTGCGGAACTAGCGTCTCCAAATTTGTCAGGAACTAGCCTTTTCTCAGCTGTAAAGCAAAATGATAATCCAAATCCATCAACCAAGGAGCCCGAACCTGGAATGTTAAGCTCATCAAAATCACCTTCTTCATGTAGTCAGAGCTCATTTTCAAGCCATTCCTGTTCCAGTATTTCGGAGCCTACACTCGCACAGAATGTTGCCAGTAGCAAAGATCCAATGGTTGGAGAAGATTGTAGAGATGGTGTGTTGAAGAGGGTAAGAAGTGAAGCAGAGCTAAAAGGGTCAAGTCTAGATGGAGCAAAGCTCTTGCCAAGATCTCAAAGCCAGGAAACACTTGGTCAACACCCAAAGAATGAGTTTCTCCAGCGCCGCACCCACCAGGTGGCTCAAAGGGAGGATGCTTACAGAGTAAAAGTGACATACGGAGATGAGATAACCCGGTTTCGGATGGCAAAGGATTGTGGTTATCAAGATCTATTAGGAGAGATTTCTAGGCGATTTAACATGGATGACATGAACAAATTCGATATCAAGTATTTGGACGACGACTCTGAGTGGGTATTACTAACATGTGCTGCTGATTTAGAGGAGTGTATTGATGTCTGTCTTTCTTCTCAGAGCCGTAAAATCAAGCTCTCACTCCATGTTTCTAATCATTGTATGAGAAGATAAGTTCATTAGATGGTAATGGCTCTTCATAATTGTGAATGTGAACTATCATATAAGGTGGTTTGTCAAGTATGTATGTCAATTACACTTTGACATGCAAACGGGTTTGTCGTTTAAAAGGACGATTCTTTGTTATAAAGGCAGTTGTT 2804 0.4351 MGDGAVSPGTLLEAPPVSSMDFDYMDELFLDGCWLEGSDFLLQSPSTCNPLFDPSFTFSWPVLETNGVLSVSSSHAGNHEQRQRPLVNESQETPINTQPISQDIINIEGSCSQSEFHSAQSSEVVRGWWIRPTPTLDPGPASFAMERLIRALEYIKDLSRDKDVLVQIWVPVNRGDRQILTTNHLPFSLGSTRLNLAKYREISETYQFSAEDGSKGLVAGLPGRVFWGKVPEWTPDVRFFRSDEYPRVDHAQEYDVRGTLALPVFEQGSRSCLGVIEVVMTTQQIKYRSQLESVCKALEAVDLRSSELSSIQNVKEACNKSYEVALPEIQEVLRSACEKHKLPLAQTWVPCIQQSKEGCRHSNDNYLHCISPVDHACHIGDPSVQAFHEACSEHHLLKGQGVAGGAFMTNQPCFSTDITSMGKTEYPLSHHARMFGLRAAVAIRLRSIHCSRDDFVLEFFMPPDCVDGEEQKKMLASLSIIIQQGCHSLRVITNNELEEEIRLSVDEVIVPAASVSARTASWVDLQRSGTAASLRTVEKSSETIGRKFSDISQQRQDPTVDESSLSSVGISKTGEKRRTKAEKTITLQVLRQYFPGSLKDAAKNIGVCTTTLKRICRKHGIKRWPSRKIKKVGHSLQKLQLVIDSVQAGSGAFQIDSFYSNFAELASPNLSGTSLFSAVKQNDNPNPSTKEPEPGMLSSSKSPSSCSQSSFSSHSCSSISEPTLAQNVASSKDPMVGEDCRDGVLKRVRSEAELKGSSLDGAKLLPRSQSQETLGQHPKNEFLQRRTHQVAQREDAYRVKVTYGDEITRFRMAKDCGYQDLLGEISRRFNMDDMNKFDIKYLDDDSEWVLLTCAADLEECIDVCLSSQSRKIKLSLHVSNHCMRR 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00030 885 MobiDBLite consensus disorder prediction 763 778 - -
Bach12g00030 885 MobiDBLite consensus disorder prediction 676 706 - -
Bach12g00030 885 Gene3D - 792 880 - -
Bach12g00030 885 ProSiteProfiles PB1 domain profile. 796 879 IPR000270 GO:0005515
Bach12g00030 885 SMART PB1_new 796 879 IPR000270 GO:0005515
Bach12g00030 885 MobiDBLite consensus disorder prediction 545 573 - -
Bach12g00030 885 MobiDBLite consensus disorder prediction 756 780 - -
Bach12g00030 885 MobiDBLite consensus disorder prediction 546 572 - -
Bach12g00030 885 Pfam RWP-RK domain 584 632 IPR003035 -
Bach12g00030 885 SUPERFAMILY CAD & PB1 domains 790 880 - -
Bach12g00030 885 Pfam PB1 domain 797 878 IPR000270 GO:0005515
Bach12g00030 885 CDD PB1_NLP 798 877 IPR034891 -
Bach12g00030 885 ProSiteProfiles RWP-RK domain profile. 571 652 IPR003035 -
Bach12g00030 885 PANTHER PROTEIN NLP8 97 878 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00030 Bach-Chr12 235514 238813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00030 20 881 NLP Transcription Factor Family AT1G20640 49.266 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bach12g00030 PB1 1.1e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00030 - - qsa:O6P43_016365 1112.83