Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00028 ATGGGAAACTGTCTTGCACATTACCATAGCCTCCGCTCCACCGCCGCCACCACTAAATCAAACACTCCTTCATCATCTGATTCTGCAGAAGCAGAAAGAAAGTCACGACCAGGCAGAGGCAGAGGCAGCAAGAATCGGAATAATGAATTGGATCAGGGAAGTGGAAGAGACAAGGTGCAGGTGGTTAAGTTTAACGGCAAGGAAGACGCGGCGAGGGCAGATGGGAGAGCTGGAAAACTCGTGACGCCAAATCTGAAAGTATTCAGTCTGGATGAGTTGAAGAGTGCTACTAGAAATTTTAGACCAGACACGGTGCTGGGGGAAGGTGGTTTTGGCCGTGTTTTCAAAGGCTGGATTGACGACAAAACCTACAAGCCTTCCAAAGTTGGTGTTGGTATCCCCGTCGCCGTCAAGAAATCTAATTCTGATAGCCTCCAAGGATTGAAAGAATGGCAGAGTGAAGTACAATTCTTGGGCAAGTTTTCTCATCCAAACGTGGTTAAACTGCTTGGCTACTGCTGGGAGGAAAATCAATTCCTCCTTGTATACGAATACATGCAGAAGGGTAGCCTGGAAAACCACCTCTTCAGAAGTCCAGAGCCACTTGCTTGGGACATAAGGCTCAAGATAGCCATAGGAGCTGCCAGAGGGCTCGCTTTCTTGCATACTTCAGAAAAGTCTGTCATATATCGAGACTTCAAGTCCTCAAACATTTTGCTTGATGAGGCTTATAATGCAAAGCTTTCAGATTTTGGATTGGCTAAGAATGGCCCAGCAAACGACAAATCCCACGTAACCACACGAGTCATGGGCACGTATGGCTACGCAGCACCCGAGTATATGGCAACCGGTCATCTATATGTGAAGAGCGATGTATATGGATTTGGGGTTGTGCTACTGGAAATGCTGACGGGCTTAATAGCACTAGACCAAAGTCGACCCGCAGGGGAACAGAATTTGGTGGAGCACTGTAAGGCATCTCTCAGCTCGAAAAAGAAGCTAAAGAAGATAGTGGACCCAGGATTGGGTGAACATTATCCACTAGCAGCCGCATTTCAAGTAGCCCAGCTCATATTGAAGTGTTTAGAATCAGACCCAAGAAATCGACCATCCATGAAAGAGGTTTTGGACGTTTTAGAGAATGCAAATGAAATTAAATATAAACCCAAGGCTAAGGGTAAGTTGAAAAAAGGCAGCCTAGTGCATCAGACTCAGACGAGTAAACCAAAAGAGGGGGAGCATTCCACTTCCTCTTCAGCCAATGCCTATAACATTAACCAACACAATCCATCTCCCATTGCCACCGCCAAATCTGGACGAGCTCCTCATTCTCACTTCCATCCACGTTAG 1350 0.4652 MGNCLAHYHSLRSTAATTKSNTPSSSDSAEAERKSRPGRGRGSKNRNNELDQGSGRDKVQVVKFNGKEDAARADGRAGKLVTPNLKVFSLDELKSATRNFRPDTVLGEGGFGRVFKGWIDDKTYKPSKVGVGIPVAVKKSNSDSLQGLKEWQSEVQFLGKFSHPNVVKLLGYCWEENQFLLVYEYMQKGSLENHLFRSPEPLAWDIRLKIAIGAARGLAFLHTSEKSVIYRDFKSSNILLDEAYNAKLSDFGLAKNGPANDKSHVTTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLIALDQSRPAGEQNLVEHCKASLSSKKKLKKIVDPGLGEHYPLAAAFQVAQLILKCLESDPRNRPSMKEVLDVLENANEIKYKPKAKGKLKKGSLVHQTQTSKPKEGEHSTSSSANAYNINQHNPSPIATAKSGRAPHSHFHPR 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00028 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Bach12g00028 449 Pfam Protein tyrosine and serine/threonine kinase 104 378 IPR001245 GO:0004672|GO:0006468
Bach12g00028 449 CDD STKc_IRAK 106 381 - -
Bach12g00028 449 FunFam Serine/threonine-protein kinase BIK1 68 185 - -
Bach12g00028 449 ProSitePatterns Protein kinases ATP-binding region signature. 106 139 IPR017441 GO:0005524
Bach12g00028 449 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 186 392 - -
Bach12g00028 449 MobiDBLite consensus disorder prediction 10 28 - -
Bach12g00028 449 SUPERFAMILY Protein kinase-like (PK-like) 85 389 IPR011009 -
Bach12g00028 449 PANTHER OS01G0588500 PROTEIN-RELATED 31 382 - -
Bach12g00028 449 MobiDBLite consensus disorder prediction 29 53 - -
Bach12g00028 449 MobiDBLite consensus disorder prediction 389 449 - -
Bach12g00028 449 Gene3D Transferase(Phosphotransferase) domain 1 186 404 - -
Bach12g00028 449 Gene3D Phosphorylase Kinase; domain 1 84 185 - -
Bach12g00028 449 MobiDBLite consensus disorder prediction 399 434 - -
Bach12g00028 449 ProSiteProfiles Protein kinase domain profile. 100 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00028 449 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00028 Bach-Chr12 212519 214823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00028 32 379 Glycoside Hydrolase AT3G07070 45.352 7.67e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bach12g00028 PK_Tyr_Ser-Thr 8.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00028 - - aprc:113865973 513.457