Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00027 TTTTTTGCCTTTTGTTTGTTTGTTACCCTTTTTAAGTGTGGTGTTTCCGCGTTTGATATGTGTTTGTTGGGGTGATTCAATTTGCTTTAAAGGAAGAGCTGGTGCTTTTCCTATATCAAATTCTCTCTCACAGGGAGATGAGCTGCTTCTTTTGCTTCAGTTCTGGTCGGAAGGATGTTGACAGAGTTGAAATTGACATTGCTACTCGATCTACTTCTTCTTTAGGGTATGGAGGAAAGGGGAAGAGTAGCAATAGTCCTGAAAGCAGTGCGGCACGTAGTTTCACGTTTCGTGAACTTGCAGCTGCAACCAGAGGTTTTAAGGAAGTGAATTTGATTGGAGAAGGGGGTTTTGGAAGGGTCTATAAGGGTCTTCTGGAAACTGGCCAGCTTGTTGCTATTAAACAATTAAGTCACGATGGTCATCAAGGTTTTCAGGAATTTATAGTAGAGGTTCTCATGTTAAGCCTGCTACACCATTCTAATCTTGTTACCTTGATTGGCTACTGTACTGATGGAGATCAAAGGCTCCTGGTTTACGAATACATGCATATGGGAAGCTTAGAAGATCATCTTTTTGATCTGAACCCAGAAAAAGAACCACTAAGCTGGACTACACGGATGAAGATTGCTGTTGGTGCTGCTAGGGGCCTCGAATATCTCCATTGTAAAGCAAATCCTCCTGTTATCTATCGCGACCTTAAATCTGCAAATATCTTATTAGACAATGACTTCAACCCAAAACTCTCAGACTTTGGGCTTGCTAAACTTGGACCAGTTGGAGACAACACTCATGTTTCAACTAGGGTGATGGGAACATATGGCTACTGCGCCCCAGAGTACGCCATGAGTGGCAAATTAACTCTTAAATCTGATATCTACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGTAGGGCTATAGATGTCAGTGGGAGACCGGGGGAACAAAACTTAGTTTCATGGTCTTGCCAGTTTTTGAAGGACCGGAGAAAGTTTATACAAATGGTTGATCCTCTTCTGCAAGGACGCTTCCCATTGCGCTGTTTGCATCACGCAATTGCTATAACTGCCATGTGCCTGCAGGAGCAGCCTAAGTTTCGTCCACTGATTAGTGATATCATTGTTGCACTGGAGTACGTAGCCTCTCAGAGTTGTGTACCTGAAGTCCGTGAAGGTGGAGTACGCAGTCCACCACCACAATCACCTTCACAACTGGAGAAAAACAAGTTTTCGGGGAACCAGAGACTACACTGAGTTCACATTCCGTCTTAGATCGAG 1286 0.437 MSCFFCFSSGRKDVDRVEIDIATRSTSSLGYGGKGKSSNSPESSAARSFTFRELAAATRGFKEVNLIGEGGFGRVYKGLLETGQLVAIKQLSHDGHQGFQEFIVEVLMLSLLHHSNLVTLIGYCTDGDQRLLVYEYMHMGSLEDHLFDLNPEKEPLSWTTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDVSGRPGEQNLVSWSCQFLKDRRKFIQMVDPLLQGRFPLRCLHHAIAITAMCLQEQPKFRPLISDIIVALEYVASQSCVPEVREGGVRSPPPQSPSQLEKNKFSGNQRLH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00027 374 SMART serkin_6 61 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00027 374 Gene3D Transferase(Phosphotransferase) domain 1 137 347 - -
Bach12g00027 374 CDD STKc_IRAK 67 335 - -
Bach12g00027 374 MobiDBLite consensus disorder prediction 346 374 - -
Bach12g00027 374 PANTHER OS07G0668900 PROTEIN 38 342 - -
Bach12g00027 374 FunFam probable serine/threonine-protein kinase RLCKVII 33 136 - -
Bach12g00027 374 ProSitePatterns Protein kinases ATP-binding region signature. 67 89 IPR017441 GO:0005524
Bach12g00027 374 FunFam Serine/threonine-protein kinase PBS1 137 350 - -
Bach12g00027 374 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Bach12g00027 374 ProSiteProfiles Protein kinase domain profile. 61 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00027 374 MobiDBLite consensus disorder prediction 354 374 - -
Bach12g00027 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Bach12g00027 374 Pfam Protein kinase domain 61 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00027 374 SUPERFAMILY Protein kinase-like (PK-like) 37 335 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00027 Bach-Chr12 206750 209601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00027 1 357 Glycoside Hydrolase AT3G07070 56.579 9.06e-148 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bach12g00027 Pkinase 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00027 - - mnt:21407579 591.652