Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00024 TCCAAATGAAGCAAATACCAAATATGCAACTTTCGCCATTTACATTTACAGAGGGCTTTTTTGTTTTTGTCAAACTAGAAAAGTAGGGCTTTCATTTACAGCTCTTTCTGAGGAGTTGGGCAAAGATAACGGGATAAGATGGATGCAAGTAATGATCCTGGCAGCCAGTCAGATGAGAACTATCATTTTGACAGGTTGCATATTGAGCCTATGTATGATGCCTTCATATGTCCTCTAACAAAGCAAGTTATGCGCGATCCTGTTACCTTAGAAAATGGGCAGACTTTTGAGCGTGAAGCGATTGAAAATTGGTTCAAGGAATGCAGGAAGAGTGGACGGAAACCAGTTTGCCCTTTGACATTAAAAGAACTAGGAAGCACAGAACTGAATCCCAGTATAGCTTTGCGTATGACCATTGGAGAGTGGACTTTCAGGAATGAAGCTGCAAAGCTAGACATGGCTCAGCGATCGTTGAATATGGGAAGTCCTGAAAATGAAACTCTGCAGGCTTTACTGTATGTCCGAGACATCTGCCAAAGAAGTCAGTCCAACAAGCAAGTTGTCCGTAATGCAGGGCTTATACCTATGATTGTTGACATGTTGAAGAGCAGCAGCCGAAAGGTTCGCTCTAGAGCTTTGGAAACCCTCAGAACTGTGGTGGAGGAAGATGATGAGAATAAGGAAATTTTGGCTGAGGGGGATATTGTGCGCACAATAGTGAAGTTCCTTTCCCATGAGCTTTCTAAAGAAAGAGAGGAAGCTGTCTCTTTGCTTTATGAACTCTCAAAATCTGAAATCCTGTGTGAGAAGATTGGTTCAATAAATGGAGCTATTCTTATATTAGTTGGAATGACAAGCAGCAAATCAGAAGATCTTTCCACCGTTGAAAAGGCTGATAAAACACTGGAGAATCTGGAGAAGTGTGAGAATAATGTACGACAGATGGCTGAAAATGGTAGACTGCAGCCTCTTCTGAACCAGCTTCTTGAAGGTCCACCAGAGGTCAAACTGTCCATGGCTGGATACCTAGGAGAGCTGGTTTCGAACAATGATGTAAAAGTCCTTGTTGCTAAGACTGTCGGTTCATCTCTGATCGATATCATGAAAAGTGGTAATTTGCATTCAAGAGAAGCTGCTCTGAAAGCTCTGAATCAGATATCATCATGTGAGCCAAGTGCTAAGGTTTTGATAGAGGCTGGAATACTTTCCCCGCTTGTCAAGGATCTTTTTGCAGAGGGTCCTAGTCAGCTTCCCATGCGTCTGAAAGAAATCTCTGCTACAATCCTTGCCAATGTTGTCTACTCAGGAGATGACTTTGACTCCATTCCTGTTGGACCTGATCACCAGACTCTGGTCTCAGAGGACATAGTTCATAATCTACTCCATCTCATTAGCAACACTGGTCCAGCTATCGAATGCAAACTTCTCCAGGTTCTTGTTGGACTTACTAGTTCTGAAACTACTGTTCCAAGTGTTGTTGCTGCTATAAAAAGCTCTGGTGCCACTATCAGTCTAGTTCAATTCATTGAGGCACCACAGAAAGATCTGCGTGTAGCTTCCATAAAACTTCTTCAGAATCTGTCCCCCGACATGGGTCAAGAACTAGCTGATGCACTGCGTGGTTCAGTTGGACAGCTTGGTAGTCTAATTAAAGTCATATCAGAAAATCTAGGGATCTCTGAAGAACAAGCAGCTGCTGTTGGCCTTCTAGCTGATCTACCTGAGAGGGATTTGGGCCTCACAAGACAGATGCTGGATGAAGGTGCCTTTCAGCTGGTCATCTCCAGAGTGGTTTCTATCAGGCAAGGGGAGATCAGAGGCAGCCGCTTTGTGACACCATTTCTTGAAGGGCTGTTGAAAATTCTTGCAAGGGTTACCTATGTCTTGGCTGATGTACCTGGTGCCATTGCACTCTGTCGTGAGAACAGTCTTGCTGCACTCTTTATAGAACTGCTTCAGTCCAATGGACTGGATAATGTACAGATGGTTTCTGCTATGGCTTTGGAGAATTTATCACAAGAATCTAAAAATTTAACAAAATTGCCTGAGGTGCCACCACCTGGTCTTTGTGCTTCAATTTTTCCATGCTTCAGTAAACAGCCTGTTATAACAGGATTGTGTAGGCTCCATCAAGGGATCTGTTCATTAAAAGAAACATTTTGCCTCTTGGAAGGACAGGCAGTCAGTAAGTTGGTAGCTCTACTTGACCACACAAATGTGAACGTGGTTGAGGCAGCACTTGCAGCCTTATCTACTTTGTTGGAAGATGGAGTTGATATTGAACATGGAGTAATGGTGCTGTGTGACGCAGAGGGGATCAAGCCAATACTTGATGTGTTGCATGAGAAAAGGTCAGACAATCTGAGGAGGAGGGCAGTATGGGCAGTTGAGAGACTATTGCGAACTGAGGATATAGCCTATGAAGTTTCCGGAAACCAAAATGTGAGCCCTGCTCTTGTTGACGCTTTCCAGAATGGTGACTATCGAACTCGGCAGATTGCTGAGCGTGCTCTCAAGCATGTTGATAAGATACCCAACTTTTCAGGCATCTTTCCGAACATGGGATAGGCCTCTTCTTCCAGATGCTTCACTCTGAAGTTGATGGTTAGCTTAAAAAAAAAAAAAAAAAAAAAAGAAACCCCTGTATGTATCTGTGATGGTTATCATCTATCTATTATGCATCCCCAAACTGTGGTTGATAGTTGTACACAAAATATCCATTCCTTATGAAAGTTCCGAAAGCTGTTCATTTGTTCATCATGACTCTCTCACTATTTTGCATTCTGTACCTTGAAC 2796 0.4306 MDASNDPGSQSDENYHFDRLHIEPMYDAFICPLTKQVMRDPVTLENGQTFEREAIENWFKECRKSGRKPVCPLTLKELGSTELNPSIALRMTIGEWTFRNEAAKLDMAQRSLNMGSPENETLQALLYVRDICQRSQSNKQVVRNAGLIPMIVDMLKSSSRKVRSRALETLRTVVEEDDENKEILAEGDIVRTIVKFLSHELSKEREEAVSLLYELSKSEILCEKIGSINGAILILVGMTSSKSEDLSTVEKADKTLENLEKCENNVRQMAENGRLQPLLNQLLEGPPEVKLSMAGYLGELVSNNDVKVLVAKTVGSSLIDIMKSGNLHSREAALKALNQISSCEPSAKVLIEAGILSPLVKDLFAEGPSQLPMRLKEISATILANVVYSGDDFDSIPVGPDHQTLVSEDIVHNLLHLISNTGPAIECKLLQVLVGLTSSETTVPSVVAAIKSSGATISLVQFIEAPQKDLRVASIKLLQNLSPDMGQELADALRGSVGQLGSLIKVISENLGISEEQAAAVGLLADLPERDLGLTRQMLDEGAFQLVISRVVSIRQGEIRGSRFVTPFLEGLLKILARVTYVLADVPGAIALCRENSLAALFIELLQSNGLDNVQMVSAMALENLSQESKNLTKLPEVPPPGLCASIFPCFSKQPVITGLCRLHQGICSLKETFCLLEGQAVSKLVALLDHTNVNVVEAALAALSTLLEDGVDIEHGVMVLCDAEGIKPILDVLHEKRSDNLRRRAVWAVERLLRTEDIAYEVSGNQNVSPALVDAFQNGDYRTRQIAERALKHVDKIPNFSGIFPNMG 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00024 809 CDD RING-Ubox_PUB 26 83 IPR045210 -
Bach12g00024 809 ProSiteProfiles HEAT repeat profile. 147 181 IPR021133 -
Bach12g00024 809 SUPERFAMILY ARM repeat 414 797 IPR016024 -
Bach12g00024 809 Coils Coil 252 272 - -
Bach12g00024 809 Pfam U-box domain 27 100 IPR003613 GO:0004842|GO:0016567
Bach12g00024 809 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 26 104 IPR013083 -
Bach12g00024 809 Gene3D - 315 483 IPR011989 -
Bach12g00024 809 ProSiteProfiles U-box domain profile. 24 103 IPR003613 GO:0004842|GO:0016567
Bach12g00024 809 Gene3D - 584 797 IPR011989 -
Bach12g00024 809 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 13 805 - -
Bach12g00024 809 SUPERFAMILY RING/U-box 20 106 - -
Bach12g00024 809 SUPERFAMILY ARM repeat 118 440 IPR016024 -
Bach12g00024 809 SMART arm_5 177 217 IPR000225 GO:0005515
Bach12g00024 809 SMART arm_5 713 755 IPR000225 GO:0005515
Bach12g00024 809 SMART arm_5 303 342 IPR000225 GO:0005515
Bach12g00024 809 SMART arm_5 262 302 IPR000225 GO:0005515
Bach12g00024 809 SMART arm_5 343 388 IPR000225 GO:0005515
Bach12g00024 809 SMART arm_5 135 175 IPR000225 GO:0005515
Bach12g00024 809 SMART arm_5 585 627 IPR000225 GO:0005515
Bach12g00024 809 SMART arm_5 668 709 IPR000225 GO:0005515
Bach12g00024 809 SMART Ubox_2 28 96 IPR003613 GO:0004842|GO:0016567
Bach12g00024 809 Gene3D - 112 314 IPR011989 -
Bach12g00024 809 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 146 188 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00024 Bach-Chr12 170468 174661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00024 16 809 U-box Gene Family AT1G20780 67.296 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00024 - - qsa:O6P43_018783 1342.02