Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00022 GATATGACCTAAGTGAAAGTCAACTTTTGTTTTGAACTGGTGCTATCTGTAATACCAACTGAACTCTTTTGCTTTGCTCTGCTCTCTCAGTTGACCTTTTAGTTCCCTACTTCACAACATTTGAGAATTATCAATTTTATAAGTTTGAATCTTGGTAACTCTCTTGCTTTCTCACGGGCTTTTGGTACATAAAAGTCAAGACACATTATCCGACTTGCAAGAGTGGGAATTTACCATCTTGATGATCCACCCAAGATTACTTGAAATCTAAAAGATTTCCATTTCCGATGCACTGCAGTTGATAATATTCAACTCAACTTAAGGAACGAAATGTCTGACTCAACAAGTCGGTGCTTCTTACTGTGAATTTGTTGAGGGCATTGAAAGTGGGAAAGAGATCACGCTGGGAACAGTGATCTTGTAGGTTGTTCTTTTAGTAATTATCAATTAATACATGATTTAGAAGTGATTATGGCTGCGGGTATGGATTTCTCTCCCCCATTTACGGTATTAGAAGGCAATTATAATAAAGATAATGTATGTGTGATGGAAGATGAGAGCTCGAACAAACTGAAACATATGACAAGTGGTAAACCCCCTCGTCACCTCTCGGTCATGAGGCATGGCGTGAGCTCTACAAGTTTGCTGGCTGCAGCGGATTTGAGTTTGGACATGAGGATTGTTGGAAATAAGTCATCATCTGACGAGAAGACTGAGTTTCTACCTATATTTCGCTCAGGAAGTTGTGCTGAAAGAGGACCTAAACAGTATATGGAGGATGAACACTTATCTGTTGATAATCTTATTGAACATCTAGGGTCAACTTCAGATATTCCTTCTCCTGGAGCTTTCTACGGGGTGTTTGATGGTCATGGAGGTACAGATGCGGCCGCATTTATAAGAAATAACATCCTCAGATTCGTAGTTGAGGATTCCCATTTTCCAACTTGTATGGAGAAGGCAATAAGAAGTGCCTTTCTGAAAGCTGATTATGCATTTGCAGATGCTAGTTCGCTTGATACCTCTTCTGGCACCACTGCTTTAACTGCTCTTGTATATGGAAGGACCCTGATAATTGCCAATGCTGGGGATTGTCGAGCTGTATTGGGGAGGCGGGGTAGAGCTATTGAGATGTCAAAAGACCACAAACCCAGTTGCATGTCAGAAAAGCTAAGAATTCAGAAACTTGGTGGAGTGGTATACGATGGATACCTGAACGGGCAACTCTCTGTTGCCCGTGCCCTAGGAGACTGGCACATGAAGGGTCCCAAAGGTTCTGCCTGCCCTTTAAGTGCGGAACCGGAGTTGCAGGAAGCCTACCTCACTGAGGATGATGAGTTCTTGATTATGGGCTGCGATGGCCTATGGGATGTTATGAGCAACCAATGTGCCGTGACCATGGCGAGGAAAGAATTGATGCTACATAATGATCCTGAACGCTGTTCAAGAGAGCTCGTCAGAGAGGCCCTTAAGCGTAATACTTGTGATAATTTAACAGTTATTGTAGTTTGTTTCTCCCCAGATCCTCCTCCTCGGATAGAAATGCCTCAATCTCGAGTTAGAAGGAGTATATCAGCAGAGGGCCTCAATCTACTTAAGGGTGTACTGGACTCTAACTCATGA 1623 0.427 MAAGMDFSPPFTVLEGNYNKDNVCVMEDESSNKLKHMTSGKPPRHLSVMRHGVSSTSLLAAADLSLDMRIVGNKSSSDEKTEFLPIFRSGSCAERGPKQYMEDEHLSVDNLIEHLGSTSDIPSPGAFYGVFDGHGGTDAAAFIRNNILRFVVEDSHFPTCMEKAIRSAFLKADYAFADASSLDTSSGTTALTALVYGRTLIIANAGDCRAVLGRRGRAIEMSKDHKPSCMSEKLRIQKLGGVVYDGYLNGQLSVARALGDWHMKGPKGSACPLSAEPELQEAYLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSPDPPPRIEMPQSRVRRSISAEGLNLLKGVLDSNS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00022 383 Gene3D - 69 351 IPR036457 -
Bach12g00022 383 ProSiteProfiles PPM-type phosphatase domain profile. 88 348 IPR001932 -
Bach12g00022 383 ProSitePatterns PPM-type phosphatase domain signature. 127 135 IPR000222 GO:0043169
Bach12g00022 383 PANTHER PROTEIN PHOSPHATASE 2C 77 346 IPR015655 GO:0004722|GO:0006470
Bach12g00022 383 SMART PP2C_SIG_2 103 348 IPR001932 -
Bach12g00022 383 FunFam Probable protein phosphatase 2C 22 73 351 - -
Bach12g00022 383 SUPERFAMILY PP2C-like 82 349 IPR036457 -
Bach12g00022 383 CDD PP2Cc 87 348 IPR001932 -
Bach12g00022 383 Pfam Protein phosphatase 2C 89 340 IPR001932 -
Bach12g00022 383 SMART PP2C_4 78 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00022 Bach-Chr12 161176 163768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00022 5 380 PP2C-type Phosphatase Gene Family AT2G33700 73.491 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00022 K14803 - qsu:112023621 667.151