Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00019 ATGAGTCGCCCCTTGAGATTCCTAGGCGAGCACAGCTCGTCGTCTATCACCAATTCACACACTGTAGACTCCGACTTCGTTGTTATCCTTGCCGCCCTTCTCTGCGCTCTAATCTGCGTTCTAGGCCTCGTGGCCGTCGCCCGCTGCGCCTGGCTCCGCCGGTTGCGTGTTTCCTCCATTATCAGCAGCAGCAGCACCGCAACTGGGCGTCCATCAGCACCACCTGCTCTTGCTTCATCAGCCAACAAAGGCCTCAAGAAAAAGATTCTGCGGTCCCTTCCAAAGCTGGCGGTGACGGCTGAATCTGCAGCGAAATTCTCGGATTGCGCGATCTGCTTGAGCGAATTGAACGCGGGAGATGAAATCCGAGTGCTGCCGCAGTGCGGGCACGGGTTCCACGTGTCGTGCATCGATACGTGGCTTGGATCGCATTCGTCGTGTCCGTCGTGTCGTCAGATTCTGGGGGTCGGCAGTGGCGGTAGGTGCTACAAGTGTGGGGGATTGTCTGCAACTGGAACGTCCAGCACAACACCTCATGGTCATGAGTCGGATTTAGAAGCCAGAATGAAGGAAAGAGAGGAGAATCTCCGTAGTACATTTTTACCTTAA 609 0.555 MSRPLRFLGEHSSSSITNSHTVDSDFVVILAALLCALICVLGLVAVARCAWLRRLRVSSIISSSSTATGRPSAPPALASSANKGLKKKILRSLPKLAVTAESAAKFSDCAICLSELNAGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILGVGSGGRCYKCGGLSATGTSSTTPHGHESDLEARMKEREENLRSTFLP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00019 202 CDD RING-H2_EL5-like 108 151 - -
Bach12g00019 202 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 16 165 - -
Bach12g00019 202 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 155 IPR013083 -
Bach12g00019 202 SMART ring_2 109 150 IPR001841 -
Bach12g00019 202 MobiDBLite consensus disorder prediction 181 202 - -
Bach12g00019 202 Pfam Ring finger domain 108 151 IPR001841 -
Bach12g00019 202 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Bach12g00019 202 MobiDBLite consensus disorder prediction 171 202 - -
Bach12g00019 202 SUPERFAMILY RING/U-box 90 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00019 Bach-Chr12 148173 148781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00019 5 202 C3H Transcription Factor Family AT1G20823 56.863 1.33e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00019 - - gmx:100794614 207.608