Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00011 ATGGAGAAGACTCTATCGGCGAAGGACGCGTTCGAGAAGCTAGAGAAAGTAGGAGAAGGGACGTATGGGAAGGTGTACAGGGCAAGAGAAAAAGCAACAGGGAAGATCGTTGCCCTGAAGAAGACTCGCCTTCACGAGGACGAAGAAGGTGTCCCTCCCACCACTCTCCGTGAGGTTTCCATTTTGCGCATGCTCTCTAGGGATCCCCATGTCGTCAGATTGATGGATGTAAAACAAGGTCAAAACAAGGAAGGGAAGACAGTGCTCTACTTGGTATTCGAGTTCATGGACACCGACCTCAAGAAATTCATTCGAAGTTTCCGTCAGACGGGGGAAAACATTCCTTCCAAGACCACTAAAAGCTTGATGTACCAACTCTGCAAGGGCGTTGCCTTCTGCCACGGTCATGGAATCTTGCACAGAGATTTGAAGCCTCATAACCTCTTGATGGACCGAAAAACAATGATGCTTAAAATAGCTGATCTTGGACTTGCTCGAGCATTTACTGTTCCAATAAAAAAATACACTCACGAGATACTAACCCTCTGGTATAGAGCTCCTGAAGTCCTTTTGGGAGCTACGCATTACTCTATGGCGGTGGACATGTGGTCAGTTGGCTGCATATTTGCTGAACTTGTCACCAAGCAAGCACTTTTTCCTGGTGATTCTGAGCTTCAACAACTCTTGCATATATTCAGGTTATTGGGTACTCCAAATGAAGAGGTTTGGCCAGGCGTTAGTAAATTAATGAATTGGCATGAGTACCCCCAATGGAGCCCTCAAAATCTGTCAACGGCTGTTCCTAATTTGGATGAGCTTGGACTGGATCTGTTATCTCAAATGCTGCAATATGAACCTTCCAAGAGGATTTCTGCAAAGAAAGCAATGGAACACCCTTACTTTGATGACCTCGACAAGACGTACCTTTAG 930 0.4581 MEKTLSAKDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEFMDTDLKKFIRSFRQTGENIPSKTTKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWSPQNLSTAVPNLDELGLDLLSQMLQYEPSKRISAKKAMEHPYFDDLDKTYL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00011 309 Gene3D Transferase(Phosphotransferase) domain 1 99 308 - -
Bach12g00011 309 FunFam Cyclin-dependent kinase 2 99 308 - -
Bach12g00011 309 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Bach12g00011 309 SUPERFAMILY Protein kinase-like (PK-like) 8 305 IPR011009 -
Bach12g00011 309 SMART serkin_6 11 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00011 309 FunFam Cyclin-dependent kinase B2,2 7 97 - -
Bach12g00011 309 Pfam Protein kinase domain 11 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00011 309 ProSiteProfiles Protein kinase domain profile. 11 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00011 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Bach12g00011 309 Gene3D Phosphorylase Kinase; domain 1 6 97 - -
Bach12g00011 309 PANTHER CELL DIVISION PROTEIN KINASE 9 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00011 Bach-Chr12 105043 107079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00011 4 309 Core Cell Cycle Gene Families AT1G20930 87.296 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Bach12g00011 Pkinase 2.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00011 K07760 - gmx:100808302 593.193