Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01533 ATGGGGCACAGTTCAAAGAAGAAGAAGCGTGGAGGCGGGAGTGGGAGGAGAAACAAGGGACGAGCAACTTTGAAAGATCATGTATCTCATTATGGTGACGATGATAACGAACTTTCAGAAGAGATTACTGCCCTATGTGCAATTTTCCAAGAAGACTGCAAGATTCTTCCTGGATCACCTCCTCAAATAATTATTAGGCTCAGGCCCCACTCAAAGGATATGGGTTATGAGGATGTTGATGTTTCTGCTTTTCTTACTGTCCGGTGCTTACCTGGCTATCCTTTCAAGTGTCCAAAGTTGCAGATTACTCCTGAGAATGGTTTATCAAACAGTGATGCTGATAAACTTTTGTCTCTCCTCCATGATCAGGCTAATTTAAATGCTAGGGAGGGACGAGTAATGGTCTTTAATTTGGTGGAGGCTGCTCAAGAATTTCTTTCTGAAATTGAGCCAGTTGGCAAATCACATGAATCTAAGCTTTTGTGCTCAACTATAGAAAGCAATGAAGAATTGCTTCTCCAAGATATAGTAACTTCAAATAGGAGTAGGTCTTTTGTATATGGCTTCATCGACCTCTTTAGTGGTTATGGAGAGTCATGGAACTGGAGTTTTGGAATGGAGGAAACTGGTGGGAAAAATTCGTCTATTTCACCCTCTACGTTAGATGCCTCAAAACATGGTTATGAGGCTCGGGGAAAAAAATCTGATACAAAGACAGAGCCATTGGTGATGCAAGAAAGTAAGAAAGGTCCACTAGTTTCTCATACATCCAAATTAGATACCTTGGTAGAAGACACTGAAGACAGCAACGTGAGTGTGTCTTCTACTTATTCAAGTAGGTCTCATGCAGAGGATTTCACAGGTAACAGCAATGAAGGTGAGAAAGAGGATTTTATCCTTGATGAATATGCTAACGAAGATAATGAGGGCATATATGGAAGTGAGTCTTCAGAGTCTCATTCCTCTGCCTCCTTGGTTACTAATCAAGCATCTCAAACAGTTGAAAAGGATCTAATAATGGTTCACTTGCTTCACCTTGCTTGTGGTTCAAAAGGACCATTTGCTGACACTTTGTCGCAAATAGCCACAGAGCTTTACAGTTTAGGGATCTTTTCTGATTGGGCACGAGATATAGCTTCTAAACAACCTTCCCTTTTTAACAAAACCTTTGATCATGTTTTCAAGAAACACCTGGTTTCATCCAGAATACCTCAATTTTGGAAACCTCCTTCAGATCTTGGAGGATCAGATGCAGTTTCCCCAAATTCTCGATATTTGAATGACTTTGAGGAGCTAAGGCCGCTTGGTCATGGTGGTTTTGGCATTGTTGTCCTTTGCAAAAATAAGCTCGATGGAAGGCAGTATGCAGTGAAGAAAATCCGTCTTAAAGACAAAAGTATCTCTGTTAATGATAGAATATTAAGGGAAGTAGCCACACTATCTCGTCTGCAGCATCAACATGTTGTTCGTTATTATCAGGCATGGATTGAAACTGGACTTGTTGAGTCTGATGATTCTACTTGGGGTTCAAAGACTCCAGTAAGCTCCACTTTCAGCTATAAAGCTGCAAGCTCCACAGATGCCCTTGGACATGAGAATCAGCTTGAATCAACCTACCTTTACATTCAAATGGAGTACTGCCCGAGGACACTCCGGCAAGAATTTGAATCGTATACTCATTTTGACAAAGAATTAGCATGGCATTTGTTTCGTCAAATTGTGGAAGGCTTGGTACACATACATGGACAAGGAATAATTCATCGGGACTTGACACCGAACAACATATTTTTTGGTGCTCGCAATGACATTAAAATTGGTGATTTTGGTCTTGCTAAGTTTTTGAAGTTGGAGCAGTTGGATCAAGATCCGGGTCATCCTGCTGATACAACTGGAGTTTCCATTGATGGCACCGGACAAGTTGGAACCTATTTCTATACGGCACCTGAAATTGAGCAAGGATGGCCTAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAACTTTGGCATCCATTTGGGACAGCAATGGAGAGACACATTGTTTTATCTGATTTGAAACAGAAAGGAGAACTCCCACTCGCTTGGATCACCGAGTTTCCAGAACAGGCTTTCTTGCTGCGGCACTTAATGTCTTCAAGTCCATCTGAACGTCCTTCTGCCACTGAACTTCTGCAGAATGCATTTCCACCACGAATGGAATCTGAGTTATTAGATGACATTCTTCGAACAATGCAGACATCAGAAGATACAAGCGTGTATGATAAAGTTGTAAATGCTATCTTTGATGAAGAGATGTTAAGCACAAAAGAACACCTTCATCGGGTGGGTAGACTGGGGACTGTTGGAGGCAACCGTTCATCCATACAGTACACAGATTTAGAAACTGAGGTTCGTGATTATGTTGTTGATGTCACCAGGGAAGTTTTCAGGCAGCATTGTGCAAAGCACCTCGAAATATTACCGATGCGATTGTTGGATGATTGTCCACAGTTTAATAGAAATGCAGTTAAAATTTTAACCCATGGGGGGGACATGCTTGAACTTTGTTACGAGCTGCGTTTGCCTTTTGTAAACTGGGTTATAACTAACCAGAAATCTTCATTCAAACGATATGAGATATCAAGTGTCTACAGAAGAGCAGTTGGACATTCAACACCAAACCACTACCTCCAGGGTGATTTTGACATTATTGGTGGTACCTCAGTATTGACAGAGGCAGAGGTCATAAAGGTGACAAGGGATATAGTCACTTTATTTTTTCATTCAGATTCATGTGACATTCATCTAAACCATGCTGACTTACTGGATGCAATTTGGTCGTGGATAGGAGTTAAGGCAGAGCACAGGCTTAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCCCAGCGTCCACAATCCTCAGAAAGGAAATCAAAATGGGTAGTGATAAGGCGTCAACTTTTGCAGGAACTGAAATTAGCAGAAGCTATTGTCAATAGGTTGCAGACAGTAGGTTTAAGATTCTGTGGAGCTGCAGATCAGTCACTTCCCAGATTAAGAGGAGCCCTGCCATCTGATAAACGTACACGCAAAGCACTTGATGAATTGTCTGAGCTATTTAGTCTTTTAAGAGCTTGGAGGATTGACAAAAACGTTTATATAGATGCACTAATGCCACCAACTGAAATTTATCATAGAGATTTATTTTTTCAGGTATACTTAACGAAAGAGAGCAATCCTGGACCACTTTCTGAAGGGCCTTTGCTGGCTGTTGGTGGTCGGTACGACTATTTAATTCAACAGATGTGGAGCCGTGACTATAAAGCAAATCCTCCTGGTGGTGTGGGGGTTAGCTTTGCCCTGGAGACAATAATTCACAATTGTCCTGTAGATTTTAAGCCCATTCGAAATGAAGCCAGCACCAGTATTCTTGTTTGTTCAAGAGGTGGAGGTGGTCTGTTGGGGGAGCGCATGGAACTAGTTGCTGAATTATGGGAGAACTTTAAGGCCGACTTTGTTCCCAACCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCCAACGAGCATGATATTAAATGTCTCGTCATCATCACTGATGCAGGTGTCTCTCAGACAGGTTCTGTTAAGGTTCGGCATCTTGAGCTTAAGAAGGAGAAGGAAGTTGAGAGAGAAAACTTAGTTAAGTTTCTATCAGATGCCATGGCAACACAATTTAGAAACCCCTCCATTTGGAATTGATCAGCTGCTATAACAAAGCCACAAATATTTCATCAGCAGACTAG 3779 0.4157 MGHSSKKKKRGGGSGRRNKGRATLKDHVSHYGDDDNELSEEITALCAIFQEDCKILPGSPPQIIIRLRPHSKDMGYEDVDVSAFLTVRCLPGYPFKCPKLQITPENGLSNSDADKLLSLLHDQANLNAREGRVMVFNLVEAAQEFLSEIEPVGKSHESKLLCSTIESNEELLLQDIVTSNRSRSFVYGFIDLFSGYGESWNWSFGMEETGGKNSSISPSTLDASKHGYEARGKKSDTKTEPLVMQESKKGPLVSHTSKLDTLVEDTEDSNVSVSSTYSSRSHAEDFTGNSNEGEKEDFILDEYANEDNEGIYGSESSESHSSASLVTNQASQTVEKDLIMVHLLHLACGSKGPFADTLSQIATELYSLGIFSDWARDIASKQPSLFNKTFDHVFKKHLVSSRIPQFWKPPSDLGGSDAVSPNSRYLNDFEELRPLGHGGFGIVVLCKNKLDGRQYAVKKIRLKDKSISVNDRILREVATLSRLQHQHVVRYYQAWIETGLVESDDSTWGSKTPVSSTFSYKAASSTDALGHENQLESTYLYIQMEYCPRTLRQEFESYTHFDKELAWHLFRQIVEGLVHIHGQGIIHRDLTPNNIFFGARNDIKIGDFGLAKFLKLEQLDQDPGHPADTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHIVLSDLKQKGELPLAWITEFPEQAFLLRHLMSSSPSERPSATELLQNAFPPRMESELLDDILRTMQTSEDTSVYDKVVNAIFDEEMLSTKEHLHRVGRLGTVGGNRSSIQYTDLETEVRDYVVDVTREVFRQHCAKHLEILPMRLLDDCPQFNRNAVKILTHGGDMLELCYELRLPFVNWVITNQKSSFKRYEISSVYRRAVGHSTPNHYLQGDFDIIGGTSVLTEAEVIKVTRDIVTLFFHSDSCDIHLNHADLLDAIWSWIGVKAEHRLKVAELLSMMGSQRPQSSERKSKWVVIRRQLLQELKLAEAIVNRLQTVGLRFCGAADQSLPRLRGALPSDKRTRKALDELSELFSLLRAWRIDKNVYIDALMPPTEIYHRDLFFQVYLTKESNPGPLSEGPLLAVGGRYDYLIQQMWSRDYKANPPGGVGVSFALETIIHNCPVDFKPIRNEASTSILVCSRGGGGLLGERMELVAELWENFKADFVPNPDPSLTEQYEYANEHDIKCLVIITDAGVSQTGSVKVRHLELKKEKEVERENLVKFLSDAMATQFRNPSIWN 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01533 1244 MobiDBLite consensus disorder prediction 310 328 - -
Bach11g01533 1244 ProSiteProfiles RWD domain profile. 40 149 IPR006575 GO:0005515
Bach11g01533 1244 MobiDBLite consensus disorder prediction 1 33 - -
Bach11g01533 1244 FunFam eIF-2-alpha kinase GCN2 417 546 - -
Bach11g01533 1244 MobiDBLite consensus disorder prediction 266 286 - -
Bach11g01533 1244 FunFam eIF-2-alpha kinase GCN2 793 1129 - -
Bach11g01533 1244 SUPERFAMILY Class II aaRS ABD-related 1139 1234 - -
Bach11g01533 1244 FunFam eIF-2-alpha kinase GCN2 550 743 - -
Bach11g01533 1244 SUPERFAMILY Class II aaRS and biotin synthetases 794 1123 IPR045864 -
Bach11g01533 1244 ProSitePatterns Protein kinases ATP-binding region signature. 435 459 IPR017441 GO:0005524
Bach11g01533 1244 Pfam RWD domain 37 146 IPR006575 GO:0005515
Bach11g01533 1244 PANTHER HISTIDYL-TRNA SYNTHETASE 783 1238 - -
Bach11g01533 1244 MobiDBLite consensus disorder prediction 309 328 - -
Bach11g01533 1244 FunFam eIF-2-alpha kinase GCN2 29 156 - -
Bach11g01533 1244 MobiDBLite consensus disorder prediction 1 16 - -
Bach11g01533 1244 Gene3D Ubiquitin Conjugating Enzyme 28 157 IPR016135 -
Bach11g01533 1244 Pfam Protein kinase domain 429 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g01533 1244 MobiDBLite consensus disorder prediction 211 250 - -
Bach11g01533 1244 Coils Coil 982 1002 - -
Bach11g01533 1244 SUPERFAMILY UBC-like 35 146 IPR016135 -
Bach11g01533 1244 Gene3D Transferase(Phosphotransferase) domain 1 549 741 - -
Bach11g01533 1244 Gene3D Bira Bifunctional Protein; Domain 2 789 1128 IPR045864 -
Bach11g01533 1244 Pfam Histidyl-tRNA synthetase 883 1121 IPR041715 -
Bach11g01533 1244 MobiDBLite consensus disorder prediction 226 243 - -
Bach11g01533 1244 Pfam Anticodon binding domain of tRNAs 1141 1236 IPR024435 -
Bach11g01533 1244 MobiDBLite consensus disorder prediction 19 33 - -
Bach11g01533 1244 CDD STKc_EIF2AK4_GCN2_rpt2 423 730 - -
Bach11g01533 1244 ProSitePatterns Tyrosine protein kinases specific active-site signature. 585 597 IPR008266 GO:0004672|GO:0006468
Bach11g01533 1244 FunFam Histidine--tRNA ligase, cytoplasmic 1136 1234 - -
Bach11g01533 1244 SMART RWD2001b 40 149 IPR006575 GO:0005515
Bach11g01533 1244 ProSiteProfiles Protein kinase domain profile. 429 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g01533 1244 MobiDBLite consensus disorder prediction 264 295 - -
Bach11g01533 1244 SUPERFAMILY Protein kinase-like (PK-like) 425 747 IPR011009 -
Bach11g01533 1244 Gene3D - 1136 1234 IPR036621 -
Bach11g01533 1244 Gene3D Phosphorylase Kinase; domain 1 417 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01533 Bach-Chr11 19150071 19175463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01533 426 673 Core Cell Cycle Gene Families AT3G48750 26.087 1.30e-19 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Bach11g01533 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01533 K16196 - gmx:100797996 1929.07