Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01516 ATGGAATACCCTTTGTCTCCCAAGGGGAAAGGGCTTGGGTATTGGACATCACCTCATGCTCAGTTGGAGGGACCAACATCATTGGATGGTTATACAAGAAATTCAATTTCAGAGGACATGCTTAACAACTTTTCAGAGCTCATGAGTTTTGATACTTATGCCGGTTGGTGCAACAGTCCATCAGCAAATGAGCAGATTTTGGCTAATGGGTTTTCGTCATTTGCACCACATGCGTCATCTGATGGATTCAATTTATTGGAACAAAGCAATGGAGCATTCTTTATGACTGAAGTTAGTGAAAATTACAATACTATGGGAAGCTCCCCTGATTACAGGGAAAAAGTTGAATTTCAGCAAGCTGACACCCCACTTGGGTTCTCTGATGATGTTAATGACACTAATAACGTGAATTCTAAACAAAACAATGGATCTTTTCAACAAATTAGTACCTTAGAAATGGGAAATTATATAATCTCCAAGTCACCTGGTTGGTCACTTGACGAGAGAATGCTGAGGGCTTTGTCCTTCTTCAAGGAATCTGCTGGTGGGGGAATATTGGTACAAGTTTGGGTACCCATAAAGCAGGGTGATCAGTTCATCTTAAGCACAAGTGAGCAACCCTATTTACTAGACAAAATGCTTGCAGGGTACCGGGAAGTGTCAAGGGCATTTACATTCTCTGCAGAACAAAAACCAGGTTTTCTCCCAGGACTTCCTGGTCGTGTGTTTATCTCCAAAGTTCCTGAATGGACTTCCAATGTTAGTTATTACAATAAGACTGAATACTTGAGGGTGGAGCATGCTATTGATCATGAGGTTCGTGGGTCAATTGCTTTTCCAGTATTTGATCTTCAGTCTGAAATGCCTTGCTGTGCTGTATTGGAACTTGTCACTACAAAGGAACAATCTGATTTTGATAGAGAAATGGAAATTGTTTGTCAAGCGCTCCAGGTTGTAAATTTAAGGACTGCTATGCCTCCCCGCCTTCTTCCCCAGTTTGTCTCAAATAACAAACGCGTAGCTTTAATGGAGATAATTGATGTCTTACGAACTGTGTGTCATGCACATAGATTGCCACTCGCATTGACATGGATTCCCTGTTGCTACACAGAGGGAGTTGGTGATGAAATTAGAGGGATACAAATAAGAGAGAATAACTCAAATTCTAGCGGAAAAGGTGTACTCTGCATTGAAGAGTCAGCATGCTATATAAATGATAGACTAATGGAAGGATTTGTTCATGCCTGTATTGAACATCATCTTGAGGAAGGGCAAGGTATAGCTGGGAAAGCTCTTCAATCAAATCACCCATTCTTCTATCCTGATGTGAAGACACATGATATTAGCGAGTATCCACTTGTTCATCATGCACGCAAATATGATTTGAATGCGGCAGTTGCAATAAGACTTAGGAGTACCTTCACTAATGATGATGATTACATATTAGAGTTCTTTCTACCTGTCAATATGAGAGGCAGTTCAGAACAGCAACTTTTATTAGACAACCTTTCAGGTACGATGCAGAGAATTTGTAGGAGTTTAAGGACAGTTTCAGATGCAGAATTATCAGGAAGAGAAGGCCCACAAGGAGGGTTCCAAAAAGAAAAAGCCTCAGGCTTTTTGTCAATGTCTAGGAGCAACTCTCAAATAGCATTCACAGAAGGTGACCATGGTTCAATCGGGAAGATGCCTTTGAAGGCATCTAACTTGAGAAACAATGGAATTGAGGCTGCTCATAATCAGGTAACGAGTGGATCAAGAAGGCAGGTAGAGAAAAAGAGAAGTACAGCGGAGAAGAATGTCAGCTTGAGTGTACTCCAGCAATATTTTTCTGGCAGTCTGAAGGATGCTGCAAAGAGCATTGGTGTTTGTCCTACAACTCTAAAAAGGATATGTAGGCAACATGGCATTTCAAGATGGCCATCTCGTAAGATTAATAAAGTGAGTCGTTCATTAAAGAAAATACAGACTGTGCTTGACTCTGTTCAGGGGGTTGAAGGAGGGTTGAAGTTTGACCCCTCTACTGGGGGGTTTGTAGGAAGTGGTTCAATCATCCAAGAATTTTATGCTCAGGGAAGTCTTCTGTTCTCTGAGAAAAGTATACCTGTAAAAGACCCTGAATTTGTTACACAAGACGTAGTTGCTGTAAATCTGCTACCTTGTACTGAACGTGATAATTCGGTGGTTAAGATGGAAGAAGATGATGTTTATTTAACTTCTGGAAACCAGCTTGGGCACTCAAGAAGTACAGTTACCCATAATTCTTGTGAGGGAGAATTGACGAAAGTAAATGCTTCTTCTGTTGATTGTAGTGAAGATTCAAAGTCAACGGCCATTGATGATGGATCATGCCATACAACTCGCCTTTGGACTAAAGATCAAGATTTTCTTAAACAGGCCTGTGTAGGTTCTGTTCTTGCCAAAGAAGGGGATAAGTCCCAGAACAAGGACAGTCTGGGATTAGAAAATGCTAACTCTGATGTCTCTCGGAGTTCAAGTTCCTTGATTGGTGGAGGGATGGAAGAGAGTATGGATGGGGACAATGGGATTGTTGATCATAGACACCCTGCTTCTTCAAGCATGACAGATTCATCAAATGGCTCTGGTTCAATGATGCATGATAGTTCATCAGCCTCTCAGAGTTTTGAGAATCAGCAGCATTTCAAAGTCAAATCAACCTGTCTTGATAGCAGGTCAAAAATTATTGTGAAAGCTACTTACAGGGAAGATACCATTCGTTTCAAGTTTGATCCATCTGCGGGTTGTTTCCAGCTATATGAAGAAGTTGCCTCAAGATTCAAATTGCAACATGGGTCATTTCAGCTCAAATATCTAGATGATGAAGAGGAATGGGTGATGTTCGTAGATGACTCAGATTTGCAGGAGTGTCTAGATATATTGGATGAAATGGGCACCCATAGTGTAAAGTTCCTTGTTCGTGATATGCCTTTTGTTTTGGGCAGCTCTGGTAGTAGCAGTAGCTTTTTGGTAGGAAACTCATAGCATATAATATGGTGCTTAAGAACCTGTTTGGATTGGCTTTAAAAAAATTCTTTTAAGATGCAAAAGCAAAAGTTAAAATTAGCTTTTTTGACACATGGAAGTGCTTTTGATCACAAATAGTGATCTACTTTTGCTTTTGTTTTTTAGAAGCACCCCGGCAAAAGCAGCTTAGTTTCTGGAGGTGCTTTTGCATTTTTTAGAAATCAATCCAAACAGTCAAATGGTAAGGAGTACTTTTGGTAGAAAATAACCAATTCAAAAAGGAGCTTTAAGTGTGCTATAACAATATCTTGGGTCCTGTCTCTTTGATTCTGAATTCAAGCTGCTTGGAGGAGTTTGTAGCCAATCCGTGATTCCCAGAAGCAGAGCTTCATTTCAACTGCAGTTCGTGCCCTACCAATGCTGTCATCACTGGCTGTTAAGCTAAGGAAGAACTTTGAAGGACGGTAATGCTTCTTCCATGCGAGTGGTGGTTGGAAGACAGAAGATATAGCTTGTATGGAAGCACTCGCATGTAATATATATGTAGTTCTGTATATGTTAGAAGTAACATAGAAGTTTCTTCTTGTAAGGATTGAGGCAAATAGCTTGTATGCCTTAATATTAGTTTGTATAGAACTCACATGCAACAGTATAATAATAGGGGAAAATAATTAGAATAATATTTAGATTAAATTAGAAGTGCTATAATATTAGTTTGTAT 3706 0.3991 MEYPLSPKGKGLGYWTSPHAQLEGPTSLDGYTRNSISEDMLNNFSELMSFDTYAGWCNSPSANEQILANGFSSFAPHASSDGFNLLEQSNGAFFMTEVSENYNTMGSSPDYREKVEFQQADTPLGFSDDVNDTNNVNSKQNNGSFQQISTLEMGNYIISKSPGWSLDERMLRALSFFKESAGGGILVQVWVPIKQGDQFILSTSEQPYLLDKMLAGYREVSRAFTFSAEQKPGFLPGLPGRVFISKVPEWTSNVSYYNKTEYLRVEHAIDHEVRGSIAFPVFDLQSEMPCCAVLELVTTKEQSDFDREMEIVCQALQVVNLRTAMPPRLLPQFVSNNKRVALMEIIDVLRTVCHAHRLPLALTWIPCCYTEGVGDEIRGIQIRENNSNSSGKGVLCIEESACYINDRLMEGFVHACIEHHLEEGQGIAGKALQSNHPFFYPDVKTHDISEYPLVHHARKYDLNAAVAIRLRSTFTNDDDYILEFFLPVNMRGSSEQQLLLDNLSGTMQRICRSLRTVSDAELSGREGPQGGFQKEKASGFLSMSRSNSQIAFTEGDHGSIGKMPLKASNLRNNGIEAAHNQVTSGSRRQVEKKRSTAEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKVSRSLKKIQTVLDSVQGVEGGLKFDPSTGGFVGSGSIIQEFYAQGSLLFSEKSIPVKDPEFVTQDVVAVNLLPCTERDNSVVKMEEDDVYLTSGNQLGHSRSTVTHNSCEGELTKVNASSVDCSEDSKSTAIDDGSCHTTRLWTKDQDFLKQACVGSVLAKEGDKSQNKDSLGLENANSDVSRSSSSLIGGGMEESMDGDNGIVDHRHPASSSMTDSSNGSGSMMHDSSSASQSFENQQHFKVKSTCLDSRSKIIVKATYREDTIRFKFDPSAGCFQLYEEVASRFKLQHGSFQLKYLDDEEEWVMFVDDSDLQECLDILDEMGTHSVKFLVRDMPFVLGSSGSSSSFLVGNS 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01516 1000 MobiDBLite consensus disorder prediction 855 882 - -
Bach11g01516 1000 MobiDBLite consensus disorder prediction 817 838 - -
Bach11g01516 1000 CDD PB1_NLP 901 981 IPR034891 -
Bach11g01516 1000 PANTHER PROTEIN NLP8 111 993 IPR045012 GO:0003700
Bach11g01516 1000 SMART PB1_new 900 982 IPR000270 GO:0005515
Bach11g01516 1000 Pfam RWP-RK domain 600 648 IPR003035 -
Bach11g01516 1000 MobiDBLite consensus disorder prediction 812 882 - -
Bach11g01516 1000 Gene3D - 897 980 - -
Bach11g01516 1000 Pfam PB1 domain 903 981 IPR000270 GO:0005515
Bach11g01516 1000 ProSiteProfiles RWP-RK domain profile. 580 668 IPR003035 -
Bach11g01516 1000 ProSiteProfiles PB1 domain profile. 900 982 IPR000270 GO:0005515
Bach11g01516 1000 SUPERFAMILY CAD & PB1 domains 895 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01516 Bach-Chr11 18939900 18945707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01516 1 996 NLP Transcription Factor Family AT2G43500 49.105 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bach11g01516 PB1 1.9e-15 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01516 - - aprc:113864503 1329.69