Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01504 CACACCCCTGTAATTGCAATTCTCATTCTGAATCTCGAAAGATTGTGACCGCAGCGTAGCAGCTTATCTTTGCAGCTAGACAATGCCGCTTCCCACCAAAGCCAGCAAGTTTCCTGTTCAGGACGGTGGCGTTGGTGCAAACAAGGACTCGGAAGATCCCGACACCCCATCCAACAACCTATGGGTCGGGAATTTGTCGCCAGAGGTGACGGACTCAGATCTCATGGACCTCTTCGCCCAGTACGGGGCGCTCGATAGTGTCACATCTTATTCGGCACGGAGTTATGCTTTCGTTTTCTTCAAGCGCATCGAAGATGCCAAAGCTGCTAAGAACGCGTTGCAAGGTGCACTTCTCCGTGGCAATCCCTTGAAGATCGAGTTTGCGAGACCGGCAAAGCCATGCAAACATCTATGGGTGGGTGGTATTAGCCCAGCTGTGACAAAAGAAGAATTGGAGTCTGAATTTCGCAAATTTGGGAAAGTTGAGGATTTTAAGTTTCTTAGAGACCGCAATTCTGCATGTGTTGAATACTTCAATCTGGAAGATGCTACCCAGGCTATGAAAAACATGAATGGAAAGCGTATGGGTGGGGAGCAGATTCGTGTCGACTTTCTCCGATCACATTCTTCAAAAAAGGAAATGTTGCTTGATTATGGGCAGACACAGGGAAAATTCCTGGGGTCTACTGAGTCCTATACTGGACAGAAAAGGCCACAGCAGTCTCAGCCATTCCTGGGGAGAAAGGGGGATGGTCAGCCATCCAATATATTGTGGGTAGGTTACCCTCCTTCTCTGCAGATTGATGAACAAATGCTTCACAATGCCATGATCTTATTTGGTGAAATTGAGAGAATTAAGAGCTTCCCTTCAAGGCATTATTCATTTGTGGAATTTAGGAGTGTGGATGAAGCTCGACGTGCTAAGGAGGGTCTTCAAGGTCGGCTTTTTAATGATCCTCGAATAACAATAATGTATTCGAGCAGTGAGTTGGCACCAGGCAAGGATTATCCTGGGTTTTACCCTGGAAGTACAGGGCCAAGACCTGACATGTTCTTGAGTGAGCATCCATTTCGACCACAGATGGATGTCTTTAGTCATAATCGTACAATGGTTTCAAATAATTTTACTGGACAGTTACCTACTGGTGGTATTATTGGACCAAATGTTCCCATCAGACCTTTTGGTCCTCAAGGTAGTCTTGAACCTCCAATTTCAGGCCCTGAGTTTAATGATCTTGGAACACTCTCCAATGCAAGCTCTAAAAGTCAAATGGGTCCAAACTGGAAAAGGCCATCTCCTCCTGCACCAGGGTTGCTGTCTTCTTCTGTGCCGGGTATTAGGCCTCCTACCAAATCCACATCTGGTGCATGGGATGTACTTGATATAAACCAATTTCAGAGAGATTCTAAACGTTCAAGGATAGATGGTGCTTTACCTGTTGATGATCCACCATTTCCTTTAAGAAATATTGATGATCGTGCATTGGGACTGGAGCAACCATATGCGGTTGATCCAATTGTTGGTGGAGGGGGGTCCAGCCCTTATGTAAACATTCAAGGAAAGACTCACCTTAGTCCAATGAGAACAAGGATCACAGCTGGAGTACCTGGTCCTGCTCAACCAGATGTTGATCATATATGGCGTGGAATTATTGCAAAAGGGGGAACACCTGTTTGTCATGCTCGCTGTGTCCCTATAGGGAAAGGGATTGGGACTGAGCTGCCTGAAGTTATTGATTGCTCAGCCAGGACAGGATTGGATATGCTTACAAAACACTATGCTGATGCTACTGGATTTGATATTGTTTTCTTTTTGCCTGATAGTGAAGATGACTTTGCTTCATACACTGAATTCCTTCGGTACCTTGGTGCAAAAGGCCGTGCTGGTGTTGCCAAATTTGTTGATGGAACCACCTTATTTTTGGTGCCTCCCTCTGATTTCCTAACAAAGGTTTTGAAAGTCACAGGACCTGAACGTCTATATGGTGTGGTTTTGAAGTTTCCACGTGTTCCAGGCAGCACATCAGTACAGCAATCAGCACATTTCCCGATTCCTTCAACTCAGTATATTGACAGGGAGCAGATTGCTCCTTCACAAGCTGAGTATGGCTTGATCCCTCCAAAAGAGGAACAGGTTTTGGCAATGGATTATAACAGATTGTTGCATGAGGAGTCTAGGCTTCCTCTGAAACCACCTTATTCTGTTACAAGTGCTCCCCCTTCTGTTCAGTCAGCACCTGCAGATTATGCCTCTGGTAATACTGCTTCTGCTTCCCAAGCTGGTGTTGCATTAACACCTGAGCTTATTGCCACTCTAGCGTCTTTCCTTCCTTCAGCCACGCAATCATCCCCGGATGGTGCTAAGTCAGCAATAGGCTCCTCAATTGTGAAGCCTTCTTTTCCTCCTCTTGCACCTACTGATGGAAACCAATCTCATATGTGGAAACAGGATCATCAAATTGCAGACCAATCCAGTGTCACTCAACAGTTGGGGAGTGTGTATAATATCCAGGGTCCTCACTATCAGGCATATATACCTCCATCTACACATGCTCAAGTGGTCTCAGGCAGTTCTCATATACAAGGCTCCACTTCCAGCTTGCAGCAGCAGGGTTCTGTTTCATCTAGACCTATGAATAATTTCATGGTACCATCTCAAAGTGGACAAGTGGCTGTATCCCCACAACCACAAGTCAGTCAGCAGTATCAGATTGATGTTGCCCATAGCACTCAGAAAGGTTATGGAGTGGTGCAGGGAACAGATGCTTCTGGTTTATATAGTTCTCAAGGTTTTCAACAACCTAATAATTCTATCACTGCCGCTAATCAAGTTCACAGTGCCAATCCTTCACAACCTCAAACAATCATGGCATACACAACCGACAAAGTGAACACAGACCCTCCTAGTCAGCAACTTCAATCCACTCTCTTTGGAGCTGGCCAGGGTACATCAGAAGTGGAAGCTGATAAGAACCAGAGATATCAATCAACATTACAATTTGCTGCCAACCTTCTATTCCAAATACAACAGCAAACCCAAGGAGGAAGAGGGCCAGGAAATCAACAGTAAAAATTGCTCTGTAGGTGTTTTGGCTGTCCTGTCATGCTCCTTTCCCGGGAGAGATTTCCGTTCGTTCGTTGACGATGAATACGTGTATGAGATGAGTACACGATGGAACACAAAATAATATTATATATATGCTGATGCAGCACTGGAAAACTAAACACGGTATCTGTCTGTTGACGAGCGAGCTCATGAGGTGGATTGCTGTTCTGTTTTAGCCCAAGACTGACTTTCTTATCTTCTTTTCACTCAGATTTTTTGTGTTCTCTTTTCTTTCCCTTCACA 3349 0.4509 MPLPTKASKFPVQDGGVGANKDSEDPDTPSNNLWVGNLSPEVTDSDLMDLFAQYGALDSVTSYSARSYAFVFFKRIEDAKAAKNALQGALLRGNPLKIEFARPAKPCKHLWVGGISPAVTKEELESEFRKFGKVEDFKFLRDRNSACVEYFNLEDATQAMKNMNGKRMGGEQIRVDFLRSHSSKKEMLLDYGQTQGKFLGSTESYTGQKRPQQSQPFLGRKGDGQPSNILWVGYPPSLQIDEQMLHNAMILFGEIERIKSFPSRHYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMYSSSELAPGKDYPGFYPGSTGPRPDMFLSEHPFRPQMDVFSHNRTMVSNNFTGQLPTGGIIGPNVPIRPFGPQGSLEPPISGPEFNDLGTLSNASSKSQMGPNWKRPSPPAPGLLSSSVPGIRPPTKSTSGAWDVLDINQFQRDSKRSRIDGALPVDDPPFPLRNIDDRALGLEQPYAVDPIVGGGGSSPYVNIQGKTHLSPMRTRITAGVPGPAQPDVDHIWRGIIAKGGTPVCHARCVPIGKGIGTELPEVIDCSARTGLDMLTKHYADATGFDIVFFLPDSEDDFASYTEFLRYLGAKGRAGVAKFVDGTTLFLVPPSDFLTKVLKVTGPERLYGVVLKFPRVPGSTSVQQSAHFPIPSTQYIDREQIAPSQAEYGLIPPKEEQVLAMDYNRLLHEESRLPLKPPYSVTSAPPSVQSAPADYASGNTASASQAGVALTPELIATLASFLPSATQSSPDGAKSAIGSSIVKPSFPPLAPTDGNQSHMWKQDHQIADQSSVTQQLGSVYNIQGPHYQAYIPPSTHAQVVSGSSHIQGSTSSLQQQGSVSSRPMNNFMVPSQSGQVAVSPQPQVSQQYQIDVAHSTQKGYGVVQGTDASGLYSSQGFQQPNNSITAANQVHSANPSQPQTIMAYTTDKVNTDPPSQQLQSTLFGAGQGTSEVEADKNQRYQSTLQFAANLLFQIQQQTQGGRGPGNQQ 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01504 995 MobiDBLite consensus disorder prediction 709 723 - -
Bach11g01504 995 CDD RRM_SF 33 99 - -
Bach11g01504 995 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 108 180 IPR000504 GO:0003723
Bach11g01504 995 FunFam Flowering time control protein FPA 23 105 - -
Bach11g01504 995 SUPERFAMILY RNA-binding domain, RBD 107 298 IPR035979 GO:0003676
Bach11g01504 995 Gene3D - 219 309 IPR012677 -
Bach11g01504 995 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 228 301 IPR000504 GO:0003723
Bach11g01504 995 SUPERFAMILY RNA-binding domain, RBD 24 105 IPR035979 GO:0003676
Bach11g01504 995 SMART rrm1_1 229 297 IPR000504 GO:0003723
Bach11g01504 995 SMART rrm1_1 32 99 IPR000504 GO:0003723
Bach11g01504 995 SMART rrm1_1 109 176 IPR000504 GO:0003723
Bach11g01504 995 MobiDBLite consensus disorder prediction 368 414 - -
Bach11g01504 995 Gene3D - 106 187 IPR012677 -
Bach11g01504 995 Gene3D - 17 105 IPR012677 -
Bach11g01504 995 MobiDBLite consensus disorder prediction 201 222 - -
Bach11g01504 995 MobiDBLite consensus disorder prediction 752 799 - -
Bach11g01504 995 MobiDBLite consensus disorder prediction 702 723 - -
Bach11g01504 995 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 31 103 IPR000504 GO:0003723
Bach11g01504 995 MobiDBLite consensus disorder prediction 1 31 - -
Bach11g01504 995 FunFam flowering time control protein FPA 221 314 - -
Bach11g01504 995 MobiDBLite consensus disorder prediction 201 221 - -
Bach11g01504 995 Pfam SPOC domain 515 631 IPR012921 -
Bach11g01504 995 MobiDBLite consensus disorder prediction 383 400 - -
Bach11g01504 995 CDD RRM_SF 110 176 - -
Bach11g01504 995 MobiDBLite consensus disorder prediction 777 799 - -
Bach11g01504 995 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 240 294 IPR000504 GO:0003723
Bach11g01504 995 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 33 97 IPR000504 GO:0003723
Bach11g01504 995 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 174 IPR000504 GO:0003723
Bach11g01504 995 PANTHER RNA RECOGNITION MOTIF-CONTAINING 24 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01504 Bach-Chr11 18729024 18739892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01504 30 291 Eukaryotic Initiation Factors Gene Family AT4G34110 24.390 2.09e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01504 - - gmx:100777570 1415.21