Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01462 ATGCATCTCGTATGGCTTGCATCGACATTGATTCTCTTGCATGGAGTATTATCAACTGAAGGATCTTTGAGACCAGATGTCGTGAAAATTGGTGCTATTTTCACGCTTAAAACTATTAACGGACAAGTTTCTAAAATCGCCATCAAAGCTGCCGAGGAAGATGTGAATTCAGACCCTCAAATCCTTGGTGGGCGTAAATTGTCTGTAAGCATGCACGACTCCAACTTCAGTAGTTTTCTTGGCTTTGTTGGGGCGCTGAAGTTCTTAGAAGCTGACACAGTAGCTATAATTGGTCCTCAAAGTTCAGTAATGGCCCCTGTACTCTCACATCTTGGGAATAAACTTCAAGTTCCTCTATTGTCATTCACAGCTCTGGATCCTACCTTGTCACCTCTTCAGTACCCTTATTTCGTCCAAACAGCGCCCAATGATATGTTCCAGATGACTGCAATTGCAGACATGGTTGATTATTTTGGTTGGAGAGGGGTCGTTGCTATTTTCAGTGACGATGATCAGAGTCGAAATGGTATCACCATATTAGGTGATAAACTTGCAGAGAAACGCTGTACCATATCTTACAAAGCAACACTCCCCCCTGATCCAAAAGCCAAACCAAGTGATGTTACTGCTCTGTTGGTGAGGGTTCAAAGTATGGAAGCTCGAGTAATTGTTCTACACACTTTCTCCAGAACAGGTCTCTTGGTTTTTGATGTTGCTAAGAAGCTAGGTATGATGGGGAAGGGATATGTCTGGATAGCCACTGATTGGCTATCGACTGTTTTAGATTCAAATTCACCACTACCTGTAAATACTTCAAACTCAATCCAAGGAGTTATTACGCTTCGCCATCACACTCCCGAATCAAAGAGAAAACAAGCTTTCATGTCAAGGTGGAAGCAGATAAGTAATGGCTCAATCGGGTTGAATCCATATGGACTCTATGCTTATGATTCTGTTTGGATAATTGCTCATGCTTTGAAAATATTTTTTGATCAAGGTGCTAACTTTTCATTTTCTAATGATACAAACTTAAGTGTTATGAGGGAGGTGTCTCTAGATCTTGATGCATTGAGCATTTTTAATGGAGGGAAGCAGTTGCTTGATAATATCTTGCGCACTAATATGACTGGATTAACAGGAATTATCCAATTCGGTTCAAAAAGGTTCCCTCCACATCCATCATATGACATCCTTAATGTAATTGCTTCGAGTTATAGGAAGATCGGATACTGGTCTAATTATTCTGGTCTTTCTGTTACTACTCCTGAGAAACTTTATACAAAGCCTGCCAACCGTTCAATTTCAAACCAGCAACTACAGAGTGTAACATGGCCAGGGGGTACAACTGAAAGGCCTCGAGGATGGGTGTTCCGCGACAATGGAAGGCAGCTGAGAATTGGAATTCCTAAGCGAGTTAGTTATCAAGATATTGTCTCACAAATGAATGACACAGTTCAAGGATATTGCATAGATGTATTTTTGGCTGCCATTAAATTGCTTCCGTATGCAGTTCCGTATAGATTCATTCCCTTTGGAGACGGACATAAGAACCCAAACTATTATGACTTTGTCAATATGATTACTTCTGGTGTCTTTGATGCAGCTGTAGGTGACATTGCTATTGTCACTGATCGAACAAAGATTGCAGATTTTACTCAACCATTTATAGGGTCAGGGCTAGTTGTGGTCGCTCCAGTAAGAAAGTTGAAGTCAAGTGCTTGGGCATTTTTGCGACCGTTCACTCCATTAATGTGGGGTGTCACAGCAATCTTTTTTCTTGTTGTTGGGGCAATTGTGTGGATTCTTGAACATAGAAAAAATGAGGAGTTCCGGGGCCCTCCTAAGAAACAGATAGCCACAATTCTCTGGTTTAGCTTTTCCACCATGTTCTTTGCGCACAGAGAAAACACAGTTAGTGCACTAGGTCGAATTGTGCTTATCATCTGGCTTTTTGTGGTTCTGATAATTAATTCAAGCTACACAGCAAGCTTGACATCAATCCTCACTGTACAACAGCTGTCCTCACCCATAACAGGAATCGAATCATTGATAACTAGCAATGAACCTATAGGATTTCAAGTGGGGTCATTTGCTGCAAACTATCTAAATGAGGAACTCAAGATTCCAAAACATAGATTGGTTCCTCTTGGCTCGCCGGAAGAATATGCTATTGCCCTTGAGAGTAGAACTGTTGCTGCTGTGGTGGATGAACGACGATATGTAGAACTATTCCTCTCAGAGCACTGCGAATTCTCAATTAGGGGCCAAGAATTCACTAAGAGTGGATGGGGATTTGCATTTCCAAGGGACTCTCCTTTATCCATTGATATGTCAACTGCCATTTTGACTCTATCTGAAAATGGTGAGCTCCAAAGAATTCATGAAAGGTGGTTTTCAGAAAAGACCTGTGGTTCCCAGAGTGCAGAGGACGAGTCTGAGCAGCTTCAATTAGAAAGCTTCTGGGGCCTGTTTCTAATCTGTGGGATAGCATGTTTTCTGGCTCTCCTTATCTACGTCAGCAAGATGGTATACCAATTTAGCCGACACTTTCCAGAAGAAGCTCGTCCTTCTAACAGTGGCAGCTCACCTTCTGTGCGGATCCAGACATTCCTAAGTTTTGTTGATGAGAAAGAAGATGTATCCCAAAGAAAGTTGAAAAGAAAATGCAAGGATATTTCGTCAAATACTTACTCGGAAGATCACAATTCAAGGAACATATCCAAGAGATCAGAAACGGAAGAGCTGCACTATGGTTAA 2757 0.4153 MHLVWLASTLILLHGVLSTEGSLRPDVVKIGAIFTLKTINGQVSKIAIKAAEEDVNSDPQILGGRKLSVSMHDSNFSSFLGFVGALKFLEADTVAIIGPQSSVMAPVLSHLGNKLQVPLLSFTALDPTLSPLQYPYFVQTAPNDMFQMTAIADMVDYFGWRGVVAIFSDDDQSRNGITILGDKLAEKRCTISYKATLPPDPKAKPSDVTALLVRVQSMEARVIVLHTFSRTGLLVFDVAKKLGMMGKGYVWIATDWLSTVLDSNSPLPVNTSNSIQGVITLRHHTPESKRKQAFMSRWKQISNGSIGLNPYGLYAYDSVWIIAHALKIFFDQGANFSFSNDTNLSVMREVSLDLDALSIFNGGKQLLDNILRTNMTGLTGIIQFGSKRFPPHPSYDILNVIASSYRKIGYWSNYSGLSVTTPEKLYTKPANRSISNQQLQSVTWPGGTTERPRGWVFRDNGRQLRIGIPKRVSYQDIVSQMNDTVQGYCIDVFLAAIKLLPYAVPYRFIPFGDGHKNPNYYDFVNMITSGVFDAAVGDIAIVTDRTKIADFTQPFIGSGLVVVAPVRKLKSSAWAFLRPFTPLMWGVTAIFFLVVGAIVWILEHRKNEEFRGPPKKQIATILWFSFSTMFFAHRENTVSALGRIVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIESLITSNEPIGFQVGSFAANYLNEELKIPKHRLVPLGSPEEYAIALESRTVAAVVDERRYVELFLSEHCEFSIRGQEFTKSGWGFAFPRDSPLSIDMSTAILTLSENGELQRIHERWFSEKTCGSQSAEDESEQLQLESFWGLFLICGIACFLALLIYVSKMVYQFSRHFPEEARPSNSGSSPSVRIQTFLSFVDEKEDVSQRKLKRKCKDISSNTYSEDHNSRNISKRSETEELHYG 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01462 918 Gene3D - 143 417 - -
Bach11g01462 918 MobiDBLite consensus disorder prediction 885 918 - -
Bach11g01462 918 FunFam Glutamate receptor 459 573 - -
Bach11g01462 918 SUPERFAMILY Periplasmic binding protein-like I 23 455 IPR028082 -
Bach11g01462 918 CDD GluR_Plant 462 798 - -
Bach11g01462 918 Gene3D - 455 572 - -
Bach11g01462 918 FunFam Glutamate receptor 573 703 - -
Bach11g01462 918 FunFam Glutamate receptor 143 303 - -
Bach11g01462 918 Pfam Ligand-gated ion channel 800 831 IPR001320 GO:0015276|GO:0016020
Bach11g01462 918 SUPERFAMILY Periplasmic binding protein-like II 441 801 - -
Bach11g01462 918 Gene3D - 46 392 - -
Bach11g01462 918 Gene3D - 764 798 - -
Bach11g01462 918 Pfam Receptor family ligand binding region 46 401 IPR001828 -
Bach11g01462 918 Pfam Bacterial extracellular solute-binding proteins, family 3 483 799 IPR001638 -
Bach11g01462 918 Gene3D - 573 703 - -
Bach11g01462 918 SMART GluR_14 463 800 IPR001320 GO:0015276|GO:0016020
Bach11g01462 918 PIRSF IGluLR_plant 1 917 IPR017103 -
Bach11g01462 918 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 888 IPR015683 -
Bach11g01462 918 CDD PBP1_GABAb_receptor_plant 29 419 IPR044440 -
Bach11g01462 918 Gene3D - 728 763 - -
Bach11g01462 918 FunFam Glutamate receptor 699 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01462 Bach-Chr11 17329029 17332990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01462 1 909 Ion Channels AT2G17260 60.710 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01462 K05387 - qsu:112010597 1340.87