Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01459 ATGGGCAACACATGCCGCGGATCTTTGAAAGAAAATTATTTTCAGGGCTACAGCCAGCCCGAAGAGCATTCCACTATCCATAACCAGCGTAACATTCCTTCTGGTCGCTCCAACTCTGACCATTCTCCAACCAGCTTGAACACTAAAGAAAACCTCAATAATAAAGATACCAGCAAAAGCTCTTATTCAGATAACAACAACTATAACACTAATCTACCCTTTGTCATTCCGTCTAAGAAAGACGCAGTCATGAGACGAGGCAATGATTACCAACCATATTACCTATTGGGTCATAAGACTCCCAACATTCGTGATCTTTACACGCTAGGCCGTAAGTTAGGACAAGGACAGTTTGGGACCACTTATTTATGCACAGAGAATTCGATGGGCACTGAATATGCTTGCAAATCCATATCCAAGAGGAAGTTGATCTCCAAGGAGGATGTGGAGGATGTCAGGAGGGAAGTTCAGATAATGCACCATTTAGCAGGTCACAAGAATATTGTCACCATTAAGGGTGCTTATGAGGATCCCTTGTATGTGCATATTGTCATGGAGCTTTGTTCCGGGGGAGAGTTGTTTGACCGCATCATCCAGAGGGGCCACTACAGCGAGAGGAAGGCTGCAGAATTGACCAAAATTATTGTCGGAGTTGTTGAGGCATGTCATTCTTTAGGGTTATGCATAGAGATCTTAAGCCTGAAAACTTCTTGTTGGTTAATAAAGATGATGATTTTTCTCTTAAAGCAATTGACTTTGGCCTTTCGGTTTTCTTTAAACCAGCTTTTCACTTACATTTACATTGATTGTCAAGTTTTCACTGATGTAGTTGGAAGCCCATATTATGTTGCTCCTGAGGTTCTACTAAAGCATTATGGGCCAGAAGCAGACGTATGGACAGCAGGTGTCATACTCTACATCTTGCTTAGTGGTGTACCACCATTTTGGGCTGAAACCCAACAGGGAATATTTGATGCTGTGTTGAAGGGACACATAGATTTTGATTCAGACCCGTGGCCCCTAATATCTGACAGCGCAAAAGATCTAATTAGGAAGATGTTATGTTCTCGGCCTTTAGAACGATTGACTGCTCATGGAGTGTTATGTCATCCATGGATTTGTGAAAATGGAGTTGCCCCTGATAGGTCACTAGACCATGCTGTCCTTTCTCGTCTCAAACAGTTCTCCGCAATGAATAAGCTAAAGAAGATGGCATTGCGGGTAATTGCTGAAAGTCTATCCGAGGAGGAGATTGCTGGTTTGAGAGAAATGTTTAAGGCTATGGATACAGATAACAGTGGTGCAATCACTTTTGATGAACTCAAAGCTGGTTTAAGAAGATATGGGTCTACCCTCAAGGATACAGAGATACGTGATCTTATGGAGGCGGCTGATGTGGACAATAGCGGAACTATCGATTATGGGGAGTTTATTGCTGCAACATTTCATCTTAACAAACTAGAGCGTGAGGAACATCTTGTAGCAGCATTTCAATATTTTGATAAGGATGGAAGTGGTTATATTACGGTTGATGAACTTCAACAAGCTTGTACAGAACATAACATGACTGATGTTTTTCTTGAAGACATTATTAGGGAAGTGGATCAAGATAATGATGGAAGGATCGATTATAGCGAATTTGTTGCCATGATGCAAAAGGGTAATGGGGGAATTGGAAGGAGGACTATGCGCAACAGTCTGAATTTGAGCATGAGAGATACGCCTAGTGCTCTTTAG 1737 0.4191 MGNTCRGSLKENYFQGYSQPEEHSTIHNQRNIPSGRSNSDHSPTSLNTKENLNNKDTSKSSYSDNNNYNTNLPFVIPSKKDAVMRRGNDYQPYYLLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSMGTEYACKSISKRKLISKEDVEDVRREVQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGLCIEILSLKTSCWLIKMMIFLLKQLTLAFRFSLNQLFTYIYIDCQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDLIRKMLCSRPLERLTAHGVLCHPWICENGVAPDRSLDHAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATFHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACTEHNMTDVFLEDIIREVDQDNDGRIDYSEFVAMMQKGNGGIGRRTMRNSLNLSMRDTPSAL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01459 578 CDD STKc_CAMK 107 372 - -
Bach11g01459 578 FunFam Calcium-dependent protein kinase 5 193 381 - -
Bach11g01459 578 FunFam Calcium-dependent protein kinase 1 109 192 - -
Bach11g01459 578 ProSitePatterns EF-hand calcium-binding domain. 429 441 IPR018247 -
Bach11g01459 578 Gene3D - 486 576 - -
Bach11g01459 578 PANTHER SERINE/THREONINE-PROTEIN KINASE 99 547 - -
Bach11g01459 578 ProSiteProfiles EF-hand calcium-binding domain profile. 452 487 IPR002048 GO:0005509
Bach11g01459 578 ProSiteProfiles EF-hand calcium-binding domain profile. 488 523 IPR002048 GO:0005509
Bach11g01459 578 FunFam Calcium-dependent protein kinase 1 381 555 - -
Bach11g01459 578 Gene3D - 414 485 - -
Bach11g01459 578 ProSitePatterns EF-hand calcium-binding domain. 535 547 IPR018247 -
Bach11g01459 578 Pfam Protein kinase domain 107 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g01459 578 ProSiteProfiles Protein kinase domain profile. 107 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g01459 578 Gene3D Phosphorylase Kinase; domain 1 109 193 - -
Bach11g01459 578 Gene3D Transferase(Phosphotransferase) domain 1 194 413 - -
Bach11g01459 578 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Bach11g01459 578 SUPERFAMILY Protein kinase-like (PK-like) 98 384 IPR011009 -
Bach11g01459 578 Pfam EF-hand domain pair 421 480 IPR002048 GO:0005509
Bach11g01459 578 Pfam EF-hand domain pair 491 552 IPR002048 GO:0005509
Bach11g01459 578 ProSitePatterns EF-hand calcium-binding domain. 465 477 IPR018247 -
Bach11g01459 578 SUPERFAMILY EF-hand 397 554 IPR011992 -
Bach11g01459 578 MobiDBLite consensus disorder prediction 19 70 - -
Bach11g01459 578 ProSiteProfiles EF-hand calcium-binding domain profile. 527 557 IPR002048 GO:0005509
Bach11g01459 578 ProSitePatterns EF-hand calcium-binding domain. 501 513 IPR018247 -
Bach11g01459 578 SMART efh_1 420 448 IPR002048 GO:0005509
Bach11g01459 578 SMART efh_1 456 484 IPR002048 GO:0005509
Bach11g01459 578 SMART efh_1 526 554 IPR002048 GO:0005509
Bach11g01459 578 SMART efh_1 492 520 IPR002048 GO:0005509
Bach11g01459 578 ProSiteProfiles EF-hand calcium-binding domain profile. 416 451 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01459 Bach-Chr11 17251362 17256449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01459 1 574 EF-hand Containing Proteins AT2G17290 76.870 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bach11g01459 Pkinase 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01459 K13412 - qsa:O6P43_002195 942.954