Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01443 ATGGGTAAGAAGGGTGGTGTCGTTGTTTTAGTTCAAGTATTGGTGGTAACCATTGCAATCTGGTGTACGAGTACAGCTCTTGGGTTCAAATGCAGCTCAGAGGGAGCTACATGTGCTGCCCTCATTGATTACACCTCTCCAAATGAAACCAATTACCAGGCTATCCAGACCCTATTCAACATCACAAACTTCATAGACCTTGTGGGTGCCAATGCCCTTCCATCGACCACCAGCCCTACCGATATCGTCCACAAAAACAAGGTTGTTCGAATCCCTTTCACCTGCAAATGTCACAATTCCACCGGATTGTCAGATGGACTTCCCCGTTACACCGTCAAGAGCGGGGATACTCTCTCCCATATAGCCGAGGAAATCTTCTCGGGACTGGTGACGTATCCACAAATCCAAGCAACCAATAATATATCGGACGCAAACAAGATAGATGTAGGGCAGGAGTTTTGGATCCCATTGCCGTGTAGCTGCGATCAGGTCAACAACACCAAGGTGTTACACTATGGACTCGTCGTTGCTTCTGGCAGCTCCGTCCAAGAGTTAGCTCAACGGTACGGCACCACACAGGACATCCTCCTTAGTCTCAATAATATGACTGATCCAAACGAACTTCTAGCCGGTCAGATTTTCGATGTTCCCCTCAAAGCTTGTTCCTTGGCGGTGAAAAATGAGTCATTGAACTTCAATTTGCTTGTTGCCAATAGTACTAACCTCTACACAGCAAATGGCTGTGTCAAGTGCAGCTGTGACTCTGCAAACAACTGGACAGCGCAATGCGTGGCATCGGAGCTTGTGCCAACCAAGTGGTCTTCCTGCCCATCAATGCAATGTCAAATTTCTAATTCTACACGACTCAACCTCGGCGACGTCACATCTTCTTGCCCCCAAACAACCTGTGCCTATGCTGGCTATACCAACAACCGAACTATCTTCACTAATCTTGTCACTGGTTCCACTTGTCCTGGTAACTGCAAAATCTTACCATATAATTAA 1005 0.4697 MGKKGGVVVLVQVLVVTIAIWCTSTALGFKCSSEGATCAALIDYTSPNETNYQAIQTLFNITNFIDLVGANALPSTTSPTDIVHKNKVVRIPFTCKCHNSTGLSDGLPRYTVKSGDTLSHIAEEIFSGLVTYPQIQATNNISDANKIDVGQEFWIPLPCSCDQVNNTKVLHYGLVVASGSSVQELAQRYGTTQDILLSLNNMTDPNELLAGQIFDVPLKACSLAVKNESLNFNLLVANSTNLYTANGCVKCSCDSANNWTAQCVASELVPTKWSSCPSMQCQISNSTRLNLGDVTSSCPQTTCAYAGYTNNRTIFTNLVTGSTCPGNCKILPYN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01443 334 Gene3D LysM domain 174 226 IPR036779 -
Bach11g01443 334 Gene3D LysM domain 108 169 IPR036779 -
Bach11g01443 334 SUPERFAMILY LysM domain 175 217 IPR036779 -
Bach11g01443 334 CDD LysM 110 155 IPR018392 -
Bach11g01443 334 Pfam LysM domain 175 217 IPR018392 -
Bach11g01443 334 Pfam LysM domain 110 156 IPR018392 -
Bach11g01443 334 ProSiteProfiles LysM domain profile. 172 216 IPR018392 -
Bach11g01443 334 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 11 327 - -
Bach11g01443 334 SUPERFAMILY LysM domain 109 157 IPR036779 -
Bach11g01443 334 CDD LysM 175 212 IPR018392 -
Bach11g01443 334 SMART LysM_2 109 156 IPR018392 -
Bach11g01443 334 SMART LysM_2 173 217 IPR018392 -
Bach11g01443 334 ProSiteProfiles LysM domain profile. 108 155 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01443 Bach-Chr11 16955333 16956617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01443 14 316 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 45.955 4.93e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01443 - - vvi:100257272 345.895