Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01432 ATGACTCACAGTACTCTCTTACTTTGTCCCATCTTTCTTCTTCTTTTCTCATTTGCCACTGCCTGTGATCGCTGCGTCCATCAATCCAAGGCTGCCTATTTCTCCAAAGCTTCTGTTCTTTCATCCGGGGCATGTGGTTATGGCTCCTTGGCACTGGAATTAAGTGGTGGGCACCTTGCTGCTGCTGTGCCCACCTTGTACAAAGATGGAGCTGGATGCGGCGCCTGCTTTCAGATAAGATGCAAGAACCCAACTCTGTGCACCAAGGCTGGGACTATGGTGCTTTTGACTGATCTCAATCACAACAATCAAACTGACTTTGTTCTCAGCAGTAGAGCTTTCATGGCTTTGGCTCAGACGGGCATGGGTCAGCAAATTTTAAAGCTTGGAATTGTTGACATTGAATACAAGAGGGTACCATGTGAATACAAAAATCAGAATTTGGCGGTGCTCGTAGAAGAAGAATCAAGCAAGAAGCCAGGTTACTTGGCAGTTCAATTTTTATATCAAGGTGGTCAAACAGAGATAGTGGCCGTTGATATAGCTCAGGTGGGATCATCAAACTGGAGCTTCATGAGCAGAAAAAATGGAGCAGTGTGGGAGACGAAAAGGGTACCAGCAGGTGCTTTGCAATTCCGGTTAGTGGTAACAGCAGGGTATGATGGTAAATGGATCTGGGCAAAGCAGGTTCTTCCTGTTGATTGGAAACCTGGCTCTGTATATGATGCTGGCCTTCAAATAACAGATATTGCACAAGAGGGCTGCTCTCCCTGCGATGATTCCATCTGGTCTTCATGA 798 0.4624 MTHSTLLLCPIFLLLFSFATACDRCVHQSKAAYFSKASVLSSGACGYGSLALELSGGHLAAAVPTLYKDGAGCGACFQIRCKNPTLCTKAGTMVLLTDLNHNNQTDFVLSSRAFMALAQTGMGQQILKLGIVDIEYKRVPCEYKNQNLAVLVEEESSKKPGYLAVQFLYQGGQTEIVAVDIAQVGSSNWSFMSRKNGAVWETKRVPAGALQFRLVVTAGYDGKWIWAKQVLPVDWKPGSVYDAGLQITDIAQEGCSPCDDSIWSS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01432 265 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Bach11g01432 265 PRINTS Expansin/Lol pI family signature 189 203 IPR007118 GO:0005576
Bach11g01432 265 PRINTS Expansin/Lol pI family signature 63 81 IPR007118 GO:0005576
Bach11g01432 265 PRINTS Expansin/Lol pI family signature 129 145 IPR007118 GO:0005576
Bach11g01432 265 PRINTS Expansin/Lol pI family signature 41 59 IPR007118 GO:0005576
Bach11g01432 265 CDD DPBB_EXLA_N 17 143 - -
Bach11g01432 265 Gene3D - 16 142 IPR036908 -
Bach11g01432 265 SUPERFAMILY PHL pollen allergen 147 242 IPR036749 -
Bach11g01432 265 Gene3D - 143 248 IPR036749 -
Bach11g01432 265 Pfam Lytic transglycolase 61 136 IPR009009 -
Bach11g01432 265 FunFam Expansin-like A2 15 142 - -
Bach11g01432 265 PRINTS Major pollen allergen Lol pI signature 61 72 IPR005795 GO:0005576|GO:0019953
Bach11g01432 265 PRINTS Major pollen allergen Lol pI signature 118 133 IPR005795 GO:0005576|GO:0019953
Bach11g01432 265 PRINTS Major pollen allergen Lol pI signature 168 183 IPR005795 GO:0005576|GO:0019953
Bach11g01432 265 PRINTS Major pollen allergen Lol pI signature 152 167 IPR005795 GO:0005576|GO:0019953
Bach11g01432 265 PRINTS Major pollen allergen Lol pI signature 219 236 IPR005795 GO:0005576|GO:0019953
Bach11g01432 265 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 161 243 IPR007117 -
Bach11g01432 265 SMART dpbb_1 60 136 IPR007112 -
Bach11g01432 265 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 146 IPR007112 -
Bach11g01432 265 Pfam Expansin C-terminal domain 155 232 IPR007117 -
Bach11g01432 265 PANTHER EXPANSIN-B3 14 246 - -
Bach11g01432 265 SUPERFAMILY Barwin-like endoglucanases 13 145 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01432 Bach-Chr11 16764666 16766088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01432 19 264 Expansin Gene Family AT4G38400 67.339 1.79e-114 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01432 - - gmx:100819849 439.499