Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01421 ATGGATTTGTTGAAGAAATCCGTCAAAACTTATGGCTCTTATAAGCATTCCAGAAAGATGATTTCTGCGGTGGAGAACACAGATACCCCTAACGAAGAGCTTCCCATTCTCTTGGATCAAGAGGATCATCATCTTTCTTCTCCTCCATTAATGTCGAATGCTACTTCTTCTTCTTCTTCTAATCGGGGAGAGGTTATCCTTAAAATTGAGGATGGTGACACGACAGGCTCACAGGGGGCTAAGATTTGGAGGGAATCTAGCTATGATTTTTGGCCCAATGGTAAAAATGATAACAAGAATATAACTAATATGCCAGGTGCTAATGATTACGTAGAGGATTTTAAGTTCCGTCAGGGAGCAGAGGATCCACCTACGAAGCTGATTGGCAATTTCTTATACAAACAGAAAACCTCTGGTAACATGTCTCTGGATATGGATTTAGAGATGGACGAACTCCGAGTCGACCGAAGTTTACCTTCGGTGGAAGAGTCCCCCATTATGTCTCCAATGAAGAATTCGGGTTCGAAGGACATGAAAGTTTCCTTCGAGGAACTTGACCACAATGTGGTTGAGATTGCTAACGAATCCGTCAGGCGAAGGCATAATAAGGACGGACAAGGTGACCAAGAATTTCCAAGACCTCCACAACCGCCACATCATCATCATCATCAAGCTAGTGGCGGAGATGGAGAGGTTGTGACGTGTACTTCAAACTACTCCTTTGAAAGGATGATTTCACCGCACAGGAAGTCTACCTTGTTAAGGAACAAAACTAAGTCAAGATTACTCGACCCACCTGAGGAACAGGATCGGAGGTCTAGTCGGGTTCTAAAATCGGGTCAACTGATATCGGGAATCTTGGGGAAGAAAGGGGATGATGATGAAGACGATCCATTTTTAGAAGACGATATACCCAACGAGTTGAAAAGGAGCCAATTTAGTGTATGGGTTTTCCTTGAGTGGTTGAGCTTGGTTTTGATAGTTGGTGCTTTCGTATGCACACTTTGTATTCCTTATTTTAGGAATAAGAGACTCTGGGAGCTCAAGTTATGGAAATGGGAAGTGATGGTTCTGGTTCTAATCTGTGGACGCTTAGTTTCTGATTGGGTAATTCGGATAGTGGTATTCTTTGTCGAAAGGAATTTCCTTTTACGGAAGAGAGTACTCTATTTTGTATATGGCGTGAGGAAGGCAGTTCAAAATTGTCTATGGTTGGGTTTTGTTTTGATTGCTTGGCATATATTATTTGATAAGAGACTTGAGAGTCAGACTAGAAGTGACTTCCTTGAATATATCACCAAGATCTTGCTGTGTTTTTTAGTGGGCACATTGATATGGTTGTTGAAAACTCTTGTGGTTAAGGTGCTGGCTTCTTCTTTCCATGTAAGCACCTACTTTGATAGGATTCAGGAGTCACTCTTTAATCAATTTGTGATTGAATCACTCTCGGGTCCCCCATTGATAGAAATTCAAAAGTCAGAGGAAGAAGAGGAACAACTTGTTGATGAGGTTCAGAAGTTGCAAAATGCTGGGATTAATATACCCCCTGACCTGAAGGCAAATGCCTTCACTGCAATCCATAGTAAAAGAGCGACCAGGAGCGGAGTGCTCCCTAAAAGCCCCATACTCAAAAGTGGAAAGCTTTCATGCCCACTTTCTAATAAAGCAGACGAGGGAATAAGTATTGATCACTTACATAAGCTGAACCCGAAAAATGTCTCTGCTTGGAATATGAAAAGGTTAATGAATATAGTCCGTCATGGGGCTATTTCTACACTGGACGAGCAGATACTTGGTACTGCTCATGGAGATGATAATACCAAACAGATTAGAAGTGAAAATGAAGCAAAAGCAGCAGCAAAGAAAATTTTTCACAACGTTGCCAGGCGGGGGTCTAGGTACATATACCTGGAGGATTTGATGCGTTTTTTGAGAGAAGATGAAGCTCTAAAAGCCATGAATTTCTTTGAAGGAGCACCTGAATCTGGGAAAATCAGCAAATCTGCCTTGAAGAATTGGGTGGTCAATGCATTCAGAGAGAGGAGAGCACTTTCTTTGTCATTGAATGATACCAAAACGGCAGTGAATAAACTACATCGAATGCTTAATTTTATAGTCGCCATTGTTGTAGTAATCATTGCGCTCTTAATATTGGAAATTGCCACCACCAGATTTCTTCTCTTTGTGAGTTCACAGGTTGTTGTGGTGACTTTTATATTTGGAAATACCTGCAAGACTATATTTGAAGCAATAATTTTCTTGTTTGTCATGCACCCTTTTGATGTGGGAGATAGGTGTGAAATTGAAGGGGTCCAGATGGTTGTAGAAGAAATGAACATATTGACAACCATATTCTTGAGATATGACAATCAGAAGATTATGTACCCTAACAATGTCCTTGCTACTATGTGTATAAATAATTACTATCGGAGTCCTGACATGGGAGACGCTGTTGAATTTTGCATACATATATCTACCCCGGCTGAAAAGATTGCACTAATAAAACACAGAATACAAAGTTTTGTTGATAACAAGAAAGAGCATTGGTATCCTTCACCCATGATAGTATTCAAGGACTTCGACCAACTAAACATGGTAAAAATGGCACTTTGGCCAACTCATAGAATGAACCACCAAGATATGGGAGAAAGATTTGTGAGGAGATCCCTTTTGATTGAAGAGATGATCAAAATTTTCAAGGAGCTTGACATTCAGTATCGTCTCTTGCCTCTTGATATTAGCGTTCGAAGCATGCCCACCACTTCTGAACGGCTTCCACCTAGTTGGGCAACAATGACAACTTGA 2805 0.4086 MDLLKKSVKTYGSYKHSRKMISAVENTDTPNEELPILLDQEDHHLSSPPLMSNATSSSSSNRGEVILKIEDGDTTGSQGAKIWRESSYDFWPNGKNDNKNITNMPGANDYVEDFKFRQGAEDPPTKLIGNFLYKQKTSGNMSLDMDLEMDELRVDRSLPSVEESPIMSPMKNSGSKDMKVSFEELDHNVVEIANESVRRRHNKDGQGDQEFPRPPQPPHHHHHQASGGDGEVVTCTSNYSFERMISPHRKSTLLRNKTKSRLLDPPEEQDRRSSRVLKSGQLISGILGKKGDDDEDDPFLEDDIPNELKRSQFSVWVFLEWLSLVLIVGAFVCTLCIPYFRNKRLWELKLWKWEVMVLVLICGRLVSDWVIRIVVFFVERNFLLRKRVLYFVYGVRKAVQNCLWLGFVLIAWHILFDKRLESQTRSDFLEYITKILLCFLVGTLIWLLKTLVVKVLASSFHVSTYFDRIQESLFNQFVIESLSGPPLIEIQKSEEEEEQLVDEVQKLQNAGINIPPDLKANAFTAIHSKRATRSGVLPKSPILKSGKLSCPLSNKADEGISIDHLHKLNPKNVSAWNMKRLMNIVRHGAISTLDEQILGTAHGDDNTKQIRSENEAKAAAKKIFHNVARRGSRYIYLEDLMRFLREDEALKAMNFFEGAPESGKISKSALKNWVVNAFRERRALSLSLNDTKTAVNKLHRMLNFIVAIVVVIIALLILEIATTRFLLFVSSQVVVVTFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIEGVQMVVEEMNILTTIFLRYDNQKIMYPNNVLATMCINNYYRSPDMGDAVEFCIHISTPAEKIALIKHRIQSFVDNKKEHWYPSPMIVFKDFDQLNMVKMALWPTHRMNHQDMGERFVRRSLLIEEMIKIFKELDIQYRLLPLDISVRSMPTTSERLPPSWATMTT 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01421 934 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 43 929 IPR016688 -
Bach11g01421 934 PIRSF Memb_At2g17000 40 933 IPR016688 -
Bach11g01421 934 FunFam Predicted mechanosensitive ion channel 759 808 - -
Bach11g01421 934 MobiDBLite consensus disorder prediction 193 233 - -
Bach11g01421 934 MobiDBLite consensus disorder prediction 193 227 - -
Bach11g01421 934 MobiDBLite consensus disorder prediction 260 274 - -
Bach11g01421 934 Coils Coil 490 510 - -
Bach11g01421 934 Pfam Mechanosensitive ion channel 701 905 IPR006685 GO:0016020|GO:0055085
Bach11g01421 934 Gene3D - 759 808 IPR023408 -
Bach11g01421 934 MobiDBLite consensus disorder prediction 255 274 - -
Bach11g01421 934 SUPERFAMILY Sm-like ribonucleoproteins 749 808 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01421 Bach-Chr11 16567716 16571379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01421 59 931 Mechanosensitive Ion Channel Family AT1G78610 55.973 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01421 K22048 - gmx:102665658 1246.11