Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01412 ATGCATAGGAAACAAGAAATGATCCCTGCCAATACTCCTTCTCTTCGCCATATCCTCTTCTGCTTCAGATCAACGGAAATAAGAGATCCCTGCCAATCCCCCTCTCTTCGCGATATCTCTCTTCTGCATCAGATCAAAGGAAAAAAGAGTTCGAAAATGGGTTTGGCTCAAAACAATCTCGATATGGAGGAGGGAAACTTGGAGATTGGAATGGAATACAGAACTGTATCTGGAGTTGCTGGGCCGTTGGTCATTCTTGAGAAAGTTAAGGGACCCAAATATCAAGAGATCGTTAATATTCGTTTAGGAGATGGAAGTACTCGGCGTGGGCAAGTTCTGGAAGTTGATGGAGAAAGGGCTGTGGTTCAGGTCTTTGAAGGTACATCTGGGATTGACAATAAGTTTACGACTGTTCAATTTACTGGAGAGGTGTTGAAAACTCCTGTCTCATTGGACATGCTTGGGCGCATATTTAATGGTTCTGGAAAACCAATTGATAATGGTCCACCCATATTGCCTGAGGCTTACTTGGATATATCAGGAAGCTCCATCAATCCTAGTGAGAGGACCTATCCTGAGGAGATGATTCAGACAGGAATTTCTACTATTGATGTTATGAACTCTATTGCTAGAGGTCAAAAGATCCCTTTGTTTTCTGCTGCTGGTCTTCCGCATAATGAAATTGCTGCTCAGATTTGTCGTCAGGCTGGCTTAGTCAAGAGATTAGAGAAGTCTGATAATCTTCTTGAGGGAGGAGAAGAGGACAATTTTGCCATTGTGTTTGCTGCTATGGGAGTTAACATGGAGACTGCACAGTTTTTTAAACGTGACTTTGAAGAGAATGGTTCAATGGAGAGAGTGACCCTTTTTCTAAATCTGGCAAATGATCCTACAATTGAGCGAATCATCACCCCTCGTATTGCCCTTACTACTGCTGAATATTTGGCTTATGAATGCGGGAAACACGTACTTGTGATACTGACAGATATGAGTTCCTATGCTGATGCTCTTCGTGAGGTATCTGCTGCACGAGAGGAAGTACCTGGAAGACGTGGATATCCTGGTTATATGTATACAGATCTGGCAACAATCTATGAACGTGCTGGAAGAATTGAGGGGCGAAAAGGCTCTATCACTCAAATTCCAATTCTGACCATGCCAAATGATGATATCACACATCCAACTCCCGATCTTACGGGATATATTACTGAGGGTCAGATATATATTGACAGACAGTTGCATAACAGACAGATATACCCACCAATCAATGTCCTTCCATCGCTTTCTCGGTTGATGAAGAGTGCCATTGGTGAGGGAATGACTAGAAGAGATCATGCTGATGTGTCCAATCAGCTCTATGCAAATTATGCCATTGGAAAGGACGTCCAAGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCATCTGAGGACCTGCTGTATCTGGAATTCTTGGACAAGTTTGAGAGGAAATTTGTTGCCCAAGGAGCTTATGACACCCGCAATATCTTCCAGTCCCTAGATATTGCATGGACTTTGCTTCGGATCTTCCCCCGGGAACTTCTTCACCGCATTCCAGCAAAAACACTTGACCAGTTTTACAGCCGTGATGCAGGTAATTGATGGATTAAGCAAACTCATACCAGATCTCCTGTTCAGTCTGCGCGGCAAAAAATCG 1678 0.4338 MHRKQEMIPANTPSLRHILFCFRSTEIRDPCQSPSLRDISLLHQIKGKKSSKMGLAQNNLDMEEGNLEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGERAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDIAWTLLRIFPRELLHRIPAKTLDQFYSRDAGN 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01412 540 PIRSF V-ATPsynth_beta/V-ATPase_B 63 540 IPR022879 -
Bach11g01412 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 435 IPR027417 -
Bach11g01412 540 Pfam ATP synthase alpha/beta family, beta-barrel domain 76 142 IPR004100 GO:0046034|GO:1902600
Bach11g01412 540 CDD ATP-synt_V_A-type_beta_N 72 143 - -
Bach11g01412 540 CDD V_A-ATPase_B 144 437 - -
Bach11g01412 540 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 57 537 IPR022879 -
Bach11g01412 540 FunFam V-type proton ATPase subunit B, brain 81 540 - -
Bach11g01412 540 ProSitePatterns ATP synthase alpha and beta subunits signature. 420 429 IPR020003 GO:0005524
Bach11g01412 540 Gene3D - 81 539 - -
Bach11g01412 540 CDD ATP-synt_V_A-type_beta_C 439 533 - -
Bach11g01412 540 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 199 429 IPR000194 GO:0005524
Bach11g01412 540 Hamap V-type ATP synthase beta chain [atpB]. 70 538 IPR022879 -
Bach11g01412 540 NCBIfam V-type ATPase subunit B 72 538 IPR005723 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01412 Bach-Chr11 16417680 16426539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01412 51 540 Primary Pumps ATPases(2) AT4G38510 96.939 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01412 K02147 - qsa:O6P43_002148 947.192