Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01405 ATGGCTATGATATTGCTTCGGGACACTGCAAAGTTGCGGTGGAAGGAAAGAGCTATAAACCCACTTTTCTCACAATTTTGTTCAAATATAGAAGCACTTAGGTCACATGAACAAAACATCGTCATGCATAACTTACCTGAGAGAATAAGGCCCCTTGTGGGTTTTAACGGCTGGGACTACTGTGTTTACTGGAAATTAAGCGAAGACCAAAGGTTTCTTGAGTGGATGGGATGTTGTTGTGCCGGGACTGAAAACACTGAAAATGCTGGCGAAGGACTTCTTTTCCCCGTTTCTACAGAGGCTCCATGCAGGGATACCATATTTCAACACACCAGAACAAAGCCTTGTGGTCTTCTTTCCCAATTTCCCACTTCCATACCCATAGATTCTGGGATTCACGCGCAGACCTTGTTATCAAACCAACACAATTGGATGAACTATTCCAACAGCTTAAATTCAAAAACTTTGGAAGAAGCAATTGGGACCCAGGTTTTGATTCCTGTGCCAGGTGGACTGGTTGAGTTGTTTGTAACTAAACAGGTATCGTGTTACTTTACTTGTATATCCTTTCTTCAAAGCTTGAGAGCTTGTGGCGTAGCATCTATTAAACCATGTAGTTTTGTGAAGGTACCTGAAGACCATCAGGTGATAGATTTTGTCATAGCCCAGTGTACACTGTTCATGGAGCAGGAGGCAGTGAACCACTCTATGAATATGGATGGAAGCTTCAACATGGACATAAATTGCATAAACCATATGCAACCAAATGCATTCTTGGGCGATGAAAAGAAATGCATGATGACAGATACCCAAGCCCAAGAGGTCCATATGCAATTTGTGGAGCCTTTCGACAAGAAGGAGCAGTCAGGGGACGACAGGGATTTAATCAAACACGTGGTGGGTCGATCAGATTCACTGTCGGATTGCAGTGATCAGAATGACGATGAGGATGATGCAAAGTATAGGAGAAGGAATGGGAAAGGGAACCAATCAAAAAACCTTGAAGCAGAGAGGAAGAGAAGGAAGAAGCTCAATGATAGGCTATACCACCTTCGGTCTTTGGTACCCAGAATTTCGAAGTTAGACAGAGCGTCTATTCTTGGCGATGCAATTGAGTTCGTGAAGGATTTGCAGAAGCAAGCGAAAGACCTCCAAGACGAGCTTGAAGAACATTCAGATAATGGCAATGAAAACAACATCAATGGCATTGGCAACAACCATGTGGATGTCCAACCAGAAATTCTTAGCCACAATAGAGGTGCTGACCTTGAGCCTGAAAATCTTACAACCCAAAATGGGTTTCGTGTGGGGACATCAGGAAATGGCTATGTCTCCAAACAGAAACAGAAGCAGAGCTTGGATACTCCTAACGATGATAAACCGACACAACAAATGGAGCCGCAAGTGGAGGTGGCTTTGATAGAAGGGAATGAGTTCTTCGTGAAGGTGTTCTGCGAACATAAGCCTGGTGGGTTTGTGAGGCTGATGGAGGCATTCAACACTCTGGGCATTGTAGTAATACATGCCACAGTGACCAGCCACCAAGGCCTTGTGTCCAATGTTTTCAAAGTAGAGAAAAAGGACAGTGACATGGTGGAGGCTGAGGATGTGAGGGATTCCTTACTGGAGCTTACAAGGAACCCATCTAGAAGATGGTCTGAGGTGGGTACAAGCACGGCATCAGACAATGTAATTGGCAAGGAGTATCAACATCACCTCCACAACCACCAGATGGGTGCCTATCCTCCTCACCATATTCACAATAATTGA 1770 0.4435 MAMILLRDTAKLRWKERAINPLFSQFCSNIEALRSHEQNIVMHNLPERIRPLVGFNGWDYCVYWKLSEDQRFLEWMGCCCAGTENTENAGEGLLFPVSTEAPCRDTIFQHTRTKPCGLLSQFPTSIPIDSGIHAQTLLSNQHNWMNYSNSLNSKTLEEAIGTQVLIPVPGGLVELFVTKQVSCYFTCISFLQSLRACGVASIKPCSFVKVPEDHQVIDFVIAQCTLFMEQEAVNHSMNMDGSFNMDINCINHMQPNAFLGDEKKCMMTDTQAQEVHMQFVEPFDKKEQSGDDRDLIKHVVGRSDSLSDCSDQNDDEDDAKYRRRNGKGNQSKNLEAERKRRKKLNDRLYHLRSLVPRISKLDRASILGDAIEFVKDLQKQAKDLQDELEEHSDNGNENNINGIGNNHVDVQPEILSHNRGADLEPENLTTQNGFRVGTSGNGYVSKQKQKQSLDTPNDDKPTQQMEPQVEVALIEGNEFFVKVFCEHKPGGFVRLMEAFNTLGIVVIHATVTSHQGLVSNVFKVEKKDSDMVEAEDVRDSLLELTRNPSRRWSEVGTSTASDNVIGKEYQHHLHNHQMGAYPPHHIHNN 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01405 589 Pfam Helix-loop-helix DNA-binding domain 333 378 IPR011598 GO:0046983
Bach11g01405 589 MobiDBLite consensus disorder prediction 423 463 - -
Bach11g01405 589 Coils Coil 327 347 - -
Bach11g01405 589 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 212 546 - -
Bach11g01405 589 CDD ACT_UUR-ACR-like 481 544 - -
Bach11g01405 589 CDD bHLH_AtAMS_like 331 393 - -
Bach11g01405 589 ProSiteProfiles ACT domain profile. 480 553 IPR002912 -
Bach11g01405 589 Gene3D - 315 394 IPR036638 GO:0046983
Bach11g01405 589 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 328 377 IPR011598 GO:0046983
Bach11g01405 589 MobiDBLite consensus disorder prediction 420 463 - -
Bach11g01405 589 Coils Coil 367 394 - -
Bach11g01405 589 MobiDBLite consensus disorder prediction 304 339 - -
Bach11g01405 589 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 47 191 IPR025610 -
Bach11g01405 589 SMART finulus 334 383 IPR011598 GO:0046983
Bach11g01405 589 MobiDBLite consensus disorder prediction 315 339 - -
Bach11g01405 589 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 330 392 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01405 Bach-Chr11 16326262 16330113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01405 42 572 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 43.051 6.27e-135 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach11g01405 bHLH-MYC_N 6.7e-19 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01405 - - gmx:100810576 603.594