LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach11g01378	ATGGATTTGGTTCGAGGCATCCTTCAACTAGTTAAAACTGAGTCCTTTTCCAACACTGCTTTACTGGGCGTGTTCTCTCTGTCGTTGTTCGTTTTCATCTTCAAGAAATTGAATGCTCTCTGGAAGGTCCAACATTCTCAACTACCACAGGTGCCAGTGGTTCCGGGGTTACCAGTGATAGGGAATCTGCTGCAATTGAAAGAGAAGAAACCGTATAAGACTTTCAAACAGTGGGCTGAGCAATATGGGCCAATTTATTCCATCAGAACTGGTGCTTCTTCCCTCATTGTTCTCAACTCTGCTGAGGTAGCCAAAGAGGCAATGGTGACTAGATATGCATCTATTTCAACCAGGAAGCTATCGAGTCCACTGATGCATCTCACTTCTGACAAATGCATGGTTGCTACAAGTGACTATAATGATTTTCACAAAATGATCAAAAAACTTATTCTCACAAATGTTCTTGGAGTAAATGCACAGAAACGACACCGTAACCTTAGGGAGATTATGATGAATAATCTTTTTACCAATTTCCTACACCGTATGAAGACTTCAACTACTCAGGTTGTAAACTTCAGGGAAGTATTTGAGTCTGAACTTTTTGGACTATCAATGAAGCAATCCCTAGGAAATGATATAGAATCCATTTATGTGGAGGATCTTGGCTGCACTTTGTCAAGAAATGAAGTATTCAAGACTTTAGTGCATGACATGCTGGAGGGAGCAATTGAAGTGGATTGGCGAGACTTCTTCCCTTATCTGAAATGGATTCCGAATAAGAGTGTTGATATGAAAATTCAACGTTTGTGCTTCCGCAGAAAAGCAGTGATGAAGGCATTGATCAATGCGCAGAAGAAGCGCATAGCGTCTGGGAATCAAGTGAATTGTTACATTGACTTCCTCTTATCTGAAGCAAAAGAACTCACGGAGGAACAAATTTACATAATTCTTTGGGAGGTCATTATTGAGACATCAGATACAACTTTAGTTACAACAGAATGGGCTATGTATGAACTTGCTAAAGACAAAATTCGACAGGAACGTCTCTACCAACATATCAAAAATGTTTGTGGACAAGAGAAGATGACAGAGGATCAAATATCTAAACTGCCATATTTAGGGGCTGTTTTCCATGAAACTTTAAGGAAGTATAGTCCAGCTCCAGTTGTACCCGTAAGATATGTCCATGAAGATACTCAGCTAGGAGGGTATCATATTCCTGCAGGAAGTCAGATCGCAATAAATTTATATGGATGCAATATGGACGAGAAGCGTTGGGAAAATCCTTATCAGTGGATGCCTGAGAGATTTCTTGATGAGAAATATGATCCTATGGACTTGTACAAGACAATGGCATTTGGAGCAGGAAAGAGGGTATGTGCTGGCTCTCTTCAAGCATCGTTAATCGCTTGCACTGCAATTGGTAGGTTGATTCAGGAGTTTGAGTGGGAGCTGAATGTTGGTGAAGAGGACAACGTTGACACAAAGGGTCTTACCACTCACAAGCTCCATCCATTACAAGTGAAACTCAAGCCTAGAAATTAA	1545	0.4065	MDLVRGILQLVKTESFSNTALLGVFSLSLFVFIFKKLNALWKVQHSQLPQVPVVPGLPVIGNLLQLKEKKPYKTFKQWAEQYGPIYSIRTGASSLIVLNSAEVAKEAMVTRYASISTRKLSSPLMHLTSDKCMVATSDYNDFHKMIKKLILTNVLGVNAQKRHRNLREIMMNNLFTNFLHRMKTSTTQVVNFREVFESELFGLSMKQSLGNDIESIYVEDLGCTLSRNEVFKTLVHDMLEGAIEVDWRDFFPYLKWIPNKSVDMKIQRLCFRRKAVMKALINAQKKRIASGNQVNCYIDFLLSEAKELTEEQIYIILWEVIIETSDTTLVTTEWAMYELAKDKIRQERLYQHIKNVCGQEKMTEDQISKLPYLGAVFHETLRKYSPAPVVPVRYVHEDTQLGGYHIPAGSQIAINLYGCNMDEKRWENPYQWMPERFLDEKYDPMDLYKTMAFGAGKRVCAGSLQASLIACTAIGRLIQEFEWELNVGEEDNVDTKGLTTHKLHPLQVKLKPRN	514

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach11g01378	514	Pfam	Cytochrome P450	54	502	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bach11g01378	514	PANTHER	ENT-KAURENE OXIDASE, CHLOROPLASTIC	28	514	IPR044225	GO:0005506\|GO:0009686\|GO:0010241\|GO:0020037\|GO:0052615
	Bach11g01378	514	CDD	CYP77_89	81	507	-	-
	Bach11g01378	514	FunFam	Ent-kaurene oxidase 2	43	514	-	-
	Bach11g01378	514	SUPERFAMILY	Cytochrome P450	41	513	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bach11g01378	514	Gene3D	Cytochrome P450	42	514	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bach11g01378	514	PRINTS	E-class P450 group I signature	450	460	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bach11g01378	514	PRINTS	E-class P450 group I signature	374	392	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bach11g01378	514	PRINTS	E-class P450 group I signature	460	483	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bach11g01378	514	PRINTS	E-class P450 group I signature	415	439	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach11g01378	Bach-Chr11	15907814	15910440	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach11g01378	46	513	Cytochrome P450	AT5G25900	65.672	0.0	662

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach11g01378	K04122		-	qsa:O6P43_016108	761.911

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