Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01312 TTTCAATTCAGTGCAGAGAAATGGAGTTTGTGGTAGCAAAAGCGTTGAAATCAAGTCTGCGCAGAGAATTGGCTTTCATGAAATCGACCCAGCAAGCGTTTTGCGATGACTATTGGTGCTTGAGTCAGAATAACGGGGTTTCCGGTGATGATTTCTCGGTGGATGACTTATTCGACTTCTCCAATGGTGAATTTCAACCTGGTGTTGTTGGTCTTGGTAACGGTGATGACTGCCAAGAAGAAGACGAAGAAAAAGACAGCCTCTCTGTTTCCTCACAGGACCGAGGCGAAGACGACAGGAGCTCCAATTCCATTAGTGTTCCCGGCACCGCCGATTACGAGTCCATCTTTGCGAGCGAACTAGCAGTTCCGGTGGATTATTTGGCGGAATTGGAGTGGGTTTCTCACTTTGTGGACGATTCTCTCCTGGAGAGCACGCTCTTATATCCCGTCCATTCAGAGCAAACAAAGAAGAGGGCTGAACCTAAGCCAGATATTGGGGAAACTCCTTGTTTCCCTTCAAAAGTACCCGTGAAAGTTAGAAGCACAAGAAGCCGGAAAGCCAACCCTAGCGCCTGGTCGTTTAGCCCATTACTTTCCGGGTCATGGTCATCTCATTCAACGACGGCTCTCATTTTCGGCAGTACCATCCAGAACTTGGAGTTATTACACGGCCTTGGTGAACCGCAGGCTAAGAAGCAGAAGAAAAATCCGGAGGCACAAACTGGTAGGTCTCAATTTCAGCGTCGGTGCAGTCACTGCCTGGTGCAGAAAACACCACAATGGAGAACCGGTCCACTAGGCCCCAAAACCCTTTGCAACGCATGTGGGGTTCGTTATAAGTCTGGTCGGCTTTTTCCAGAGTACAGACCGGCCTGTAGTCCAACCTTCTCCGGCGAAGTTCACTCAAACAGCCATCGTAAAGTGTTAGAGATGAGGAGAAGGAAGGAGATGGTTGGACTGCGGTCCGGGTTGAACCAGACACCAATGGTTCCGAGTTGCTGA 1004 0.494 MEFVVAKALKSSLRRELAFMKSTQQAFCDDYWCLSQNNGVSGDDFSVDDLFDFSNGEFQPGVVGLGNGDDCQEEDEEKDSLSVSSQDRGEDDRSSNSISVPGTADYESIFASELAVPVDYLAELEWVSHFVDDSLLESTLLYPVHSEQTKKRAEPKPDIGETPCFPSKVPVKVRSTRSRKANPSAWSFSPLLSGSWSSHSTTALIFGSTIQNLELLHGLGEPQAKKQKKNPEAQTGRSQFQRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRYKSGRLFPEYRPACSPTFSGEVHSNSHRKVLEMRRRKEMVGLRSGLNQTPMVPSC 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01312 327 Gene3D - 238 312 IPR013088 GO:0006355|GO:0008270
Bach11g01312 327 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 240 301 - -
Bach11g01312 327 PANTHER GATA TRANSCRIPTION FACTOR 35 311 - -
Bach11g01312 327 SMART GATA_3 238 292 IPR000679 GO:0006355|GO:0043565
Bach11g01312 327 Pfam GATA zinc finger 244 277 IPR000679 GO:0006355|GO:0043565
Bach11g01312 327 CDD ZnF_GATA 243 292 IPR000679 GO:0006355|GO:0043565
Bach11g01312 327 PIRSF Txn_fac_GATA_plant 12 323 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bach11g01312 327 MobiDBLite consensus disorder prediction 78 94 - -
Bach11g01312 327 ProSiteProfiles GATA-type zinc finger domain profile. 238 274 IPR000679 GO:0006355|GO:0043565
Bach11g01312 327 ProSitePatterns GATA-type zinc finger domain. 244 269 IPR000679 GO:0006355|GO:0043565
Bach11g01312 327 MobiDBLite consensus disorder prediction 64 100 - -
Bach11g01312 327 FunFam GATA transcription factor 234 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01312 Bach-Chr11 14304385 14305504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01312 8 325 C2C2-Gata Transcription Factor Family AT5G66320 42.308 1.48e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach11g01312 GATA 2.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01312 - - qsa:O6P43_011543 392.119