Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01298 ATGGAGAAACTGTTCCTTTATCTCTTTGGCTTCATGCTCACACAGCATTGCCTTATGGCTAGCTTGGCCGTAAGTGTTACCAACTCCTCTACTGATGAATCTGCACTTCTTGCTTTAAAAGCCTCACTCGATTTAAACCCTGATAATGTTTTATCTATCAATTGGTCTAGCTCTTCGTCTTTTTGTAACTGGATTGGTGTTACATGTGGTGTCCATCATAAAAGAGTGAGAATCTTGAATCTCAGCCTCATGGGGCTCAGTGGCACTATACCTCCACAGCTAGGAAATCTTTCTTTCCTTGTTGAGCTTGACCTTCGCAACAATAGCTTCCATGGTCAGTTGCCACAGGATTTACTCCGATTGCATCGACTGAAGCTGGTGAACTTGAGCTATAATGGATTCAGTGGAGAAATTCCTGATTGGATAGGCCGCTTATCTATGTTGCAGTATTTGAGCTTCCGAAACAACAGTTTCAGTGGCTTTATTCCTCTGTCTATATCCAACTTGTCAATGCTACAGACCTTGGATTGGAACAACAATCTCATCATTGGAAGCATTCCACCTGAGATTGGTCAACTTCGCAAGTTGAAGATTTTACGCATCGCAGCTAATAAGCTTTGGGGAACCATACCTCAAACAATTTCCAACATATCTTCACTTGAATTATTGAGTTTACCTGATAATTCATTATCAGGAAACCTTCCAAAAGGGATTGGTTATCTTCCACAACTAAGAGAAATCTATTTCAGTGATAATCAACTCTCTGGTTCCATTTTGTTGACATTCTTCAATAAGTTAGTGCTGGAGAAGATTGATCTTAGTAATAATAGATTCAGAAAAGGACACATTCCAAGTGATATTGGAAACTTGACTAATCTTCAGATTTTGAGTCTTTATAATTGCAACCTTGAAGGAAAAATTCCAAAGGAGATTGGTAATCTTGAGCAACTAAGAGAAATCTATCTTGGACATAATCAACTCTCAGTGTTGGAGGAGATTGATCTTGGTTATAATAGATTCATAAAAGGACACATTCCAAGTGACATTGGAAACTTGACTAATATTCAGATTTTGAGTCTTTATAACTGCAACCTTGAAGGAAAAATTCCAAAGGAGATTGGTAATCTTGAGCAACTAAGAGAAATCTATCTTGGACATAATCAACTCTCAGGAAACCTTCTAAAAGAGATTGCTGATCTTCCACAACTAAGAAAAATCTATTTAAGTGATAATCAACTCTCTGGTTCCATTTTGTTGACATTCTTCAATAAGTCAGTGTTGGAGGAGATTGATCTTGGTTATAATAGATTCATAAAAGGACACATTCCAAGTGATATTGGAAATTTGACTAATCTTCAGATTTTGGGTCTTCATAACTGCAACCTAGAAGGAAAAATTCCAAAGGAGATTGGTAATCTTAAACAACTAAGAGAAATCTATCTTGGAGAGAATCAGCTCTCAGAATACGGATCAATGGGAATTGTTTCTGTTAAAGGAGATGTGTACAGCTATGGAATTATGTTGATGGAAATATTCACAAGAAAGAAACCAACAGATGAGATGTTTGTAGATGGATCCAGCTTAAAAGGTTGGATTAGTGAATCAGTGCCCCATGCAATAATGAATATTGTAGATTCTAATTTATTGCATGGACAACAAATTGATAATATGATGGCACATGCATCATCTATTTTGAGGTTAGCCTTGAAATGTTGTGAAGATTTACCTGAAGCACGAATCAATATGATGGATGTTGTTGCATCACTGAAAAAGGTCAAGATGGAGTTCATACAAAAAGCAAGGGTGGCATTAATTTAA 1818 0.368 MEKLFLYLFGFMLTQHCLMASLAVSVTNSSTDESALLALKASLDLNPDNVLSINWSSSSSFCNWIGVTCGVHHKRVRILNLSLMGLSGTIPPQLGNLSFLVELDLRNNSFHGQLPQDLLRLHRLKLVNLSYNGFSGEIPDWIGRLSMLQYLSFRNNSFSGFIPLSISNLSMLQTLDWNNNLIIGSIPPEIGQLRKLKILRIAANKLWGTIPQTISNISSLELLSLPDNSLSGNLPKGIGYLPQLREIYFSDNQLSGSILLTFFNKLVLEKIDLSNNRFRKGHIPSDIGNLTNLQILSLYNCNLEGKIPKEIGNLEQLREIYLGHNQLSVLEEIDLGYNRFIKGHIPSDIGNLTNIQILSLYNCNLEGKIPKEIGNLEQLREIYLGHNQLSGNLLKEIADLPQLRKIYLSDNQLSGSILLTFFNKSVLEEIDLGYNRFIKGHIPSDIGNLTNLQILGLHNCNLEGKIPKEIGNLKQLREIYLGENQLSEYGSMGIVSVKGDVYSYGIMLMEIFTRKKPTDEMFVDGSSLKGWISESVPHAIMNIVDSNLLHGQQIDNMMAHASSILRLALKCCEDLPEARINMMDVVASLKKVKMEFIQKARVALI 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01298 605 SMART LRR_typ_2 352 376 IPR003591 -
Bach11g01298 605 SMART LRR_typ_2 241 264 IPR003591 -
Bach11g01298 605 SMART LRR_typ_2 314 337 IPR003591 -
Bach11g01298 605 SMART LRR_typ_2 169 193 IPR003591 -
Bach11g01298 605 SMART LRR_typ_2 97 121 IPR003591 -
Bach11g01298 605 SMART LRR_typ_2 400 423 IPR003591 -
Bach11g01298 605 SMART LRR_typ_2 449 473 IPR003591 -
Bach11g01298 605 SMART LRR_typ_2 290 313 IPR003591 -
Bach11g01298 605 SMART LRR_sd22_2 376 402 - -
Bach11g01298 605 SMART LRR_sd22_2 290 305 - -
Bach11g01298 605 SMART LRR_sd22_2 473 488 - -
Bach11g01298 605 SMART LRR_sd22_2 193 219 - -
Bach11g01298 605 SMART LRR_sd22_2 145 171 - -
Bach11g01298 605 SMART LRR_sd22_2 314 335 - -
Bach11g01298 605 SUPERFAMILY L domain-like 54 327 - -
Bach11g01298 605 Gene3D Ribonuclease Inhibitor 329 418 IPR032675 -
Bach11g01298 605 SUPERFAMILY RNI-like 268 491 - -
Bach11g01298 605 Gene3D Ribonuclease Inhibitor 195 328 IPR032675 -
Bach11g01298 605 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Bach11g01298 605 Gene3D Transferase(Phosphotransferase) domain 1 488 602 - -
Bach11g01298 605 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Bach11g01298 605 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 488 582 - -
Bach11g01298 605 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 328 417 - -
Bach11g01298 605 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 146 327 - -
Bach11g01298 605 Pfam Leucine rich repeat 194 254 IPR001611 GO:0005515
Bach11g01298 605 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Bach11g01298 605 SUPERFAMILY Protein kinase-like (PK-like) 488 593 IPR011009 -
Bach11g01298 605 FunFam Leucine-rich repeat receptor-like kinase 32 145 - -
Bach11g01298 605 Gene3D Ribonuclease Inhibitor 419 487 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01298 Bach-Chr11 14099077 14110742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01298 488 597 Receptor kinase-like Gene Family AT5G20480 33.636 5.09e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach11g01298 PK_Tyr_Ser-Thr 3.7e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01298 - K13420 pcin:129317447 388.267