Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01270 ATGGAGAAACTGTTCCTTTGTCTCTTTGGCTTCATGCTCACACAGCATTGCCTTATGTCTAGCTTGGCCATAAGTGTTACCAACTCCTCTACTGATGAATCTGCACTTCTTGCTTTAAAAGCCTCACTCAATTTAAACCCTGATGAAGTTATATCTATCAATTGGTCTAGTTCTTTGTCTTTTTGTAACTGGATTGGTGTTACTTGTGGTGTCCATCATAAAAGAGTGAGAGTCTTGAATCTCAGCCTCATGGGGCCCAGTGGCACCATACCTCCACAGCTAGGAAATCTTTCTTTCCTTGTTGAACTTGATCTTAGCAACAATAGCTTCCATGGTCAGTTGCCACAGGATTTACTCCGATTGCATCAATTGAAGCTGGTGAACTTGAGCTATAATGGATTCAGTGGAGAAATTCCTAATTGGATAGGCCGCTTATTTATGTTGCAGCATTTGAGCTTCCGAAACAATAATTTCAATGGTTTTATTCCTCCATCTATATCCAACTTGTCAATGCTACAAACTTTGGATTGGAATGTCAATAACATCACTGGAAGCATTCCACCTGAGATTGGTCAACTTCGCAACTTGAAGATTTTACGCATTGCAGCTAATAAGCTTTCGGGAACCATACCTCAAACAATTTCCAACATGTCTTCTCTTGAATTATTGAGTTTACCTTATAACTCATTATCAGGAAACCTTTCAAAAGAGATCGGTGATCTTCTACAACTAAGAATAATCTATCTTTATGATAATCAGCTGTCGGTGTTGGAGGCGATTGATCTTGGTTATAATAGATTCAGAAAAGGACACATTCCAAGTGACATTGGAAACTTCACTAATCTTCAGATTTTGTATCTTGATAACTGCAACCTTAAAGTGTTGGAGGAGATTGATCTTGGTTATAATAGATTCAGAAAAGGACACATTCCAAGTGACATTGGAAACTTGACTAATCTTCAGATTTTGTATCTTGATAATTGCAACCTTAAAGGAAAAATTCCAAAAGAGATTGGTAATCTTGAACAACTAAGAGAAATCTATCTTTCACATAATCAGCTCTCAGAATACGGATCACTGGGAATTGTTTCTGTTAAAGGAGATGTGTACAGCTATGGAATTATGTTGATGGAAATATTCACAAGAAAGAAACCAACAGATGAGATGTTTGTAGATGGATCCAGCTTAAAAGGTTGGATTAGTGAATCAGTGCCCCATGCAATAATGAATATTGTAGATTCTAATTTATTGCATGGACAACAAATTGATAATATGATGGCACATGCATCATCTATTCTGAGGTTAGCCTTGAAATGTTGTGAAGATTTACCCGAAGCACGAATCAATATGATGGATGTTGTTGCATCACTGAAAAAGATCAAGATGGGGTTCATACAAAAAGCAAGGGTGACATCAATTTAA 1422 0.3706 MEKLFLCLFGFMLTQHCLMSSLAISVTNSSTDESALLALKASLNLNPDEVISINWSSSLSFCNWIGVTCGVHHKRVRVLNLSLMGPSGTIPPQLGNLSFLVELDLSNNSFHGQLPQDLLRLHQLKLVNLSYNGFSGEIPNWIGRLFMLQHLSFRNNNFNGFIPPSISNLSMLQTLDWNVNNITGSIPPEIGQLRNLKILRIAANKLSGTIPQTISNMSSLELLSLPYNSLSGNLSKEIGDLLQLRIIYLYDNQLSVLEAIDLGYNRFRKGHIPSDIGNFTNLQILYLDNCNLKVLEEIDLGYNRFRKGHIPSDIGNLTNLQILYLDNCNLKGKIPKEIGNLEQLREIYLSHNQLSEYGSLGIVSVKGDVYSYGIMLMEIFTRKKPTDEMFVDGSSLKGWISESVPHAIMNIVDSNLLHGQQIDNMMAHASSILRLALKCCEDLPEARINMMDVVASLKKIKMGFIQKARVTSI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01270 473 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Bach11g01270 473 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 291 359 - -
Bach11g01270 473 PANTHER UNNAMED PRODUCT 100 355 - -
Bach11g01270 473 SMART LRR_typ_2 97 121 IPR003591 -
Bach11g01270 473 SMART LRR_typ_2 241 265 IPR003591 -
Bach11g01270 473 SMART LRR_typ_2 193 217 IPR003591 -
Bach11g01270 473 SMART LRR_typ_2 341 364 IPR003591 -
Bach11g01270 473 SMART LRR_typ_2 317 340 IPR003591 -
Bach11g01270 473 SMART LRR_typ_2 145 169 IPR003591 -
Bach11g01270 473 SMART LRR_typ_2 279 302 IPR003591 -
Bach11g01270 473 Gene3D Ribonuclease Inhibitor 294 362 IPR032675 -
Bach11g01270 473 SUPERFAMILY Protein kinase-like (PK-like) 358 462 IPR011009 -
Bach11g01270 473 SUPERFAMILY L domain-like 56 359 - -
Bach11g01270 473 Pfam Protein tyrosine and serine/threonine kinase 362 457 IPR001245 GO:0004672|GO:0006468
Bach11g01270 473 Gene3D Ribonuclease Inhibitor 184 293 IPR032675 -
Bach11g01270 473 FunFam Leucine-rich repeat receptor-like kinase 32 143 - -
Bach11g01270 473 Pfam Leucine rich repeat 194 254 IPR001611 GO:0005515
Bach11g01270 473 Pfam Leucine rich repeat 295 354 IPR001611 GO:0005515
Bach11g01270 473 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Bach11g01270 473 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 144 234 - -
Bach11g01270 473 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01270 Bach-Chr11 13130273 13144542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01270 356 465 Receptor kinase-like Gene Family AT5G20480 34.545 4.42e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach11g01270 PK_Tyr_Ser-Thr 2.8e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01270 - K13420 pcin:129286441 347.436