Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01115 ATGGTTCTCTCCAAAGCTGGTCCCCATTCCGATGTGTCCGTACACTCAACCTTCGCTTCTCGTTACGTCCGCACCTCGCTTCCAAGGTTCAGGATGCCGGAGGAATCGATTCCGAAGGAGGCTGCGTACCAGATCATAAACGACGAGCTGATGCTCGACGGGAACCCAAGGCTGAATCTGGCTTCGTTCGTGACGACGTGGATGGAGCCGGAGTGCGATAAGCTCATCATGGCTGCCATTAACAAGAACTACGTCGACATGGACGAGTATCCGGTCACCACTGAGCTACAGAACCGGTGTGTCAACATGATAGCTCATCTTTTCAATGCACCACTTGAAGAGTCAGAAACTGCAGTTGGTGTTGGCACCGTTGGGTCATCAGAGGCCATAATGTTGGCAGGGTTAGCATTCAAGAGGAAGTGGCAGAACAAGAGGAAAGCAGCAGGATTGCCTTATGACAAGCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGTTGGGAGAAATTTGCAAGGTACTTCGAAGTGGAGTTGAAGGAGGTGAAGCTTAGGGATGGATACTACGTAATGGACCCCGAGATAGCAGCGGAAATGGTGGATGAGAACACTATCTGTGTTGCTGCTATTCTTGGTTCCACGCTCAATGGGGAGTTTGAAGACGTCAAACGCTTGAATGATCTCCTAATTGAAAAGAACAAGGAAACTGGATGGGATACTCCAATTCATGTGGATGCAGCCAGTGGTGGCTTCATTGCACCATTTCTAAATCCGGAGCTTGAGTGGGATTTCCGCTTGCCACTGGTGAAGAGCATCAACGTTAGTGGCCACAAGTATGGACTTGTCTATGCCGGAATTGGTTGGGTCATTTGGAGAAGCAAGGAAGACTTGCCTGACGAACTCATCTTCCACATTAACTACCTTGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGTCAAGTTATTGCTCAGTACTACCAACTAATTCGCTTGGGTTATGAGGGATACAAGAATGTGATGGAAAACTGCAGAGACAACATGATGGTACTGAAACAGGGACTTGAGAACACAGAACGTTTCAACATTATATCCAAAAATGAGGGAGTACCTTTGGTGGCCTTTACACTGAAGGATAACAGCCACTTCGACGAGTTCCAAGTGTCTGACTTTTTGAGACGCTATGGGTGGATAGTGCCAGCATACACCATGCCTCCTGATGCCCAGCATGTGACCGTGCTTCGTGTTGTGATCAGAGAGGACTTTTCTCGAACACTTGCTGAGCGTCTCGTGATTGACATTCAGAAAGTGTTGCACGAGCTGGATGCCCTTCCTGTAAGGGTTGCCGAAGCCGCTGCTGTAGCTGTTAGTAGCGAAGATATTGCTAGCAATGGCGCTACTGCGGCCATTGCTAAGAAGACTGCACTGGAGACAACAAGGGAAATCACCAATGCATGGAAGAAATTTGTGATGGACAGGAAGAAGATGAATGAGAAGATGAATGGTGTTTGCTAA 1524 0.4816 MVLSKAGPHSDVSVHSTFASRYVRTSLPRFRMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAAGLPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEIAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNKETGWDTPIHVDAASGGFIAPFLNPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMMVLKQGLENTERFNIISKNEGVPLVAFTLKDNSHFDEFQVSDFLRRYGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVIDIQKVLHELDALPVRVAEAAAVAVSSEDIASNGATAAIAKKTALETTREITNAWKKFVMDRKKMNEKMNGVC 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01115 507 FunFam Glutamate decarboxylase 361 448 - -
Bach11g01115 507 CDD DOPA_deC_like 59 439 - -
Bach11g01115 507 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bach11g01115 507 Gene3D - 66 360 IPR015421 GO:0003824
Bach11g01115 507 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Bach11g01115 507 FunFam Glutamate decarboxylase 66 360 - -
Bach11g01115 507 Gene3D - 1 65 - -
Bach11g01115 507 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bach11g01115 507 PANTHER GLUTAMATE DECARBOXYLASE 1 498 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bach11g01115 507 FunFam Glutamate decarboxylase 1 65 - -
Bach11g01115 507 Gene3D - 361 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01115 Bach-Chr11 10189096 10195104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01115 1 507 Calmodulin-binding Proteins AT5G17330 82.840 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01115 K01580 - gmx:100796533 891.723