Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01105 AAATTGGCTTGCAAATTAAGTGCAGCTTAAGTCATGAAACCCAATTTTCATCTTGAGGTGGAGGCCACTGCAGAAAATGAATCTGAAGTTAGCAGCCAGGTTGCGTCCAATATATCTTTTTTAGAAACAACTGCAGGTCCTTGCAGTGAGAACCTTACTGACTCTTCCAACCTGACAAATCCAATACGGATTGATCCAAATTCAGATGCTGTTTCACTTGATTTAACTCTCAACTTCAATAATAATGAGTCTGGGGCTAGAGATTCAACAGGACTCTCATTCTCAAGCACTAGCGAGAGTAGCAATGAACCTGCCTCTCAAACTACTGCAGCAACTGTTCTACGGGTATTCTCTTGCAATTACTGTCAGCGCAAATTCTATAGTTCACAGGCTCTTGGGGGCCATCAGAATGCACATAAGAGAGAAAGAACAATTGCAAAGCGGGCTATGCGTATGGGGTTTTTCTCTGAGAAATATACCAGTCTAGCATCTCTCCCTCTGCATGGTTCTTTCAGGTCCTTAGGCATAAAAGCACATTCTTCACTGCACCAAGGTTTTCCACCAACAATGAAGCCTGCTGAGATGCATAGCAATGCAAAATTTGAGCAAGGATATCTGAATATGCCCATGTTCTTGGAGGATGATGAGGCAGAACTGTTATGGCCTGGTAGTTTCCGTCAAGTTTCTGAGGTAGGTCATACACATAAGGATTTCATAGTGACTGGAAATTCAGATTTAACTTTTACAGAGGTAAATCCTCAACTAGACTTAGACAACTCCACACCAGATTTGACATTGAAACTTTGAATGAAACCCAATTTTCATCTTGAGGTGGAGGCCACTGCAGAAAATGAATCTGAAGTTAGCAGCCAGGTTGCGTCCAATATATCTTTTTTAGAAACAACTGCAGGTCCTTGCAGTGAGAACCTTACTGACTCTTCCAACCTGACAAATCCAATACGGATTGATCCAAATTCAGATGCTGTTTCACTTGATTTAACTCTCAACTTCAATAATAATGAGTCTGGGGCTAGAGATTCAACAGGACTCTCATTCTCAAGCACTAGCGAGAGTAGCAATGAACCTGCCTCTCAAACTACTGCAGCAACTGTTCTACGGGTATTCTCTTGCAATTACTGTCAGCGCAAATTCTATAGTTCACAGGCTCTTGGGGGCCATCAGAATGCACATAAGAGAGAAAGAACAATTGCAAAGCGGGCTATGCGTATGGGGTTTTTCTCTGAGAAATATACCAGTCTAGCATCTCTCCCTCTGCATGGTTCTTTCAGGTCCTTAGGCATAAAAGCACATTCTTCACTGCACCAAGGTTTTCCACCAACAATGAAGCCTGCTGAGATGCATAGCAATGCAAAATTTGAGCAAGGATATCTGAATATGCCCATGTTCTTGGAGGATGATGAGGCAGAACTGTTATGGCCTGGTAGTTTCCGTCAAGTTTCTGAGGTAGGTCATACACATAAGGATTTCATAGTGACTGGAAATTCAGATTTAACTTTTACAGAGGTAAATCCTCAACTAGACTTAGACAACTCCACACCAGATTTGACATTGAAACTTTGAAGGGACTAAATGACTCAGATATCGCTTTGGTTCTTCTTCTTTCTTGTTTAATCTGTGTATAGTAAGACATGCATGCAACGTCCATGGCTGCCTGATTGATTATTATACTTCAGTTCTCTTGTAGTAATGCTTCCTTTGGTGTTTTACTCTATGTTTCTTATTGTATAAGAGGTCTGGGAGGAGACCTTTGGAGCTTATGTACTGCTTGTTATATAAACCTTGCCTTTTGTTTACTGGAATTACTGAGCTTCCAG 1835 0.4131 MKPNFHLEVEATAENESEVSSQVASNISFLETTAGPCSENLTDSSNLTNPIRIDPNSDAVSLDLTLNFNNNESGARDSTGLSFSSTSESSNEPASQTTAATVLRVFSCNYCQRKFYSSQALGGHQNAHKRERTIAKRAMRMGFFSEKYTSLASLPLHGSFRSLGIKAHSSLHQGFPPTMKPAEMHSNAKFEQGYLNMPMFLEDDEAELLWPGSFRQVSEVGHTHKDFIVTGNSDLTFTEVNPQLDLDNSTPDLTLKL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01105 257 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Bach11g01105 257 MobiDBLite consensus disorder prediction 75 96 - -
Bach11g01105 257 SUPERFAMILY beta-beta-alpha zinc fingers 104 133 IPR036236 -
Bach11g01105 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Bach11g01105 257 FunFam Zinc finger protein 2 83 152 - -
Bach11g01105 257 Gene3D Classic Zinc Finger 83 152 - -
Bach11g01105 257 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 55 194 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01105 Bach-Chr11 10078131 10079191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01105 88 257 C2H2 Transcription Factor Family AT1G66140 49.744 1.70e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach11g01105 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01105 - - gmx:100794851 400.593