Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01103 TTTTCTGGTTCTGTACGTTGTGAAATTGATTTTAATCTGCAAAATGGTTCTGTCTTGGACAAAAGGAAGAGTTTTTCGCCGTGCCCACAAAGGGAAAAAGCTTGCCGGTGGTGATTTGGAGGTTGAAATTCTTCCCCCTGCCCATTTCCGGTGCCCAGTGAGTATGGATTTGATGAGGGATCCGGTGACCTTGTCTACTGGGATTACCTACGACAGGGATAGCATCGAGAAGTGGTTTGAATCAGGGAACCAGACATGTCCTGTCACTAATCAAGTGTTGAACAGCTTTGAGGTGATACCGAATCATGCCATTCGCAGGATGATTCAAGATTGGTGTGTGGAGCACAAGTCTTATGGAATTGAAAGAATTCCCACACCTCGGATCCCGGTGGCGCCGTACCAGGTTTCCGAGACCTGTGACAAGATAATTGCTGCAACTAGAGCTGGAGATGACAGCAAGTGTCGGGAATTGGCGGGGAAGATCAAGGTTTGGGGGAAAGAGAGTGAGAGGAACAGAAGGTGTATCGTAGAAAATGGAGCTGGTGCTGTGCTAGCTGATGCCTTTGATTCATTCTCAAGCGTTTCAATTGAGAGGTATGCTGCGGTATTAGAGGAGATCTTGGGGGTATTGACATTGGTATCCCCACTTGGAGAAGAGGGAAAGTCAAAGCTGGGTTCAGCAGCCTCTCTACGTTGCATGGTTTGGTTCCTAAACGGGAAAGACCTTTCTGCAAAGCAAAACGCAGCCTTGCTGCTCAAGGAACGACCTGTGAATGCTTTGGCCAAAACTGGAGGAGTTTCTGAAGGTTTGGTGAACATGATTAGGAACCCAATTGGACCTACTCCTACTAAGGCTTCTTTGAGAACAATTTTCCACTTGGTTTCATCATCTGTGGACAAAGAGAGAATCGGGCAGAGATTTGTGGAACTGGGTTTGGTTCAATTGCTGCTGGATACTCTTGTTGATGCAGATAGAGGGATATCTGAGAAGGCTCTGGGTGTTCTGGATTGTCTCTGTGATTGCGTAGAAGGCAAGAAACTGGCCAAAGCAAATGCTTTGATTATGCCAGTTACAGTTAAGAAGATTCTAAGGGTGTCTGAGTTGGCTTCAGAATTTGCAGTCTCTCTTCTTTGGAAGCTTTGTGACAAGGAGGATGAGGGGATTCTGATTGAGGCAATTCAAGTGGGAGCATTTCAGAAGCTCTTGGTTCTGTTGCAGGTGGGTTGTGGTGAGAGCACAAAGGAGAAGGCTACTGAGTTATTGAAATTGCTGCATGGTTACAAGAGCAGAGCAGAGTGTGTTGATTCATCATTGGATTTGAAGTACCTGAAGAAGCCCTATTAAATGGTTCTGTCTTGGACAAAAGGAAGAGTTTTTCGCCGTGCCCACAAAGGGAAAAAGCTTGCCGGTGGTGATTTGGAGGTTGAAATTCTTCCCCCTGCCCATTTCCGGTGCCCAGTGAGTATGGATTTGATGAGGGATCCGGTGACCTTGTCTACTGGGATTACCTACGACAGGGATAGCATCGAGAAGTGGTTTGAATCAGGGAACCAGACATGTCCTGTCACTAATCAAGTGTTGAACAGCTTTGAGGTGATACCGAATCATGCCATTCGCAGGATGATTCAAGATTGGTGTGTGGAGCACAAGTCTTATGGAATTGAAAGAATTCCCACACCTCGGATCCCGGTGGCGCCGTACCAGGTTTCCGAGACCTGTGACAAGATAATTGCTGCAACTAGAGCTGGAGATGACAGCAAGTGTCGGGAATTGGCGGGGAAGATCAAGGTTTGGGGGAAAGAGAGTGAGAGGAACAGAAGGTGTATCGTAGAAAATGGAGCTGGTGCTGTGCTAGCTGATGCCTTTGATTCATTCTCAAGCGTTTCAATTGAGAGGTATGCTGCGGTATTAGAGGAGATCTTGGGGGTATTGACATTGGTATCCCCACTTGGAGAAGAGGGAAAGTCAAAGCTGGGTTCAGCAGCCTCTCTACGTTGCATGGTTTGGTTCCTAAACGGGAAAGACCTTTCTGCAAAGCAAAACGCAGCCTTGCTGCTCAAGGAACGACCTGTGAATGCTTTGGCCAAAACTGGAGGAGTTTCTGAAGGTTTGGTGAACATGATTAGGAACCCAATTGGACCTACTCCTACTAAGGCTTCTTTGAGAACAATTTTCCACTTGGTTTCATCATCTGTGGACAAAGAGAGAATCGGGCAGAGATTTGTGGAACTGGGTTTGGTTCAATTGCTGCTGGATACTCTTGTTGATGCAGATAGAGGGATATCTGAGAAGGCTCTGGGTGTTCTGGATTGTCTCTGTGATTGCGTAGAAGGCAAGAAACTGGCCAAAGCAAATGCTTTGATTATGCCAGTTACAGTTAAGAAGATTCTAAGGGTGTCTGAGTTGGCTTCAGAATTTGCAGTCTCTCTTCTTTGGAAGCTTTGTGACAAGGAGGATGAGGGGATTCTGATTGAGGCAATTCAAGTGGGAGCATTTCAGAAGCTCTTGGTTCTGTTGCAGGTGGGTTGTGGTGAGAGCACAAAGGAGAAGGCTACTGAGTTATTGAAATTGCTGCATGGTTACAAGAGCAGAGCAGAGTGTGTTGATTCATCATTGGATTTGAAGTACCTGAAGAAGCCCTATTAATTCATGATGATGCATTAGATTTCTTGTTCCCCATTTTTTGTATAGGTCATAGAAACAACAATACAGTGTACAGAGATAAACACTTATACAAAGAACACAAATCAATTGAAATTTTGAAGTTCAATTTTTG 2777 0.4552 MVLSWTKGRVFRRAHKGKKLAGGDLEVEILPPAHFRCPVSMDLMRDPVTLSTGITYDRDSIEKWFESGNQTCPVTNQVLNSFEVIPNHAIRRMIQDWCVEHKSYGIERIPTPRIPVAPYQVSETCDKIIAATRAGDDSKCRELAGKIKVWGKESERNRRCIVENGAGAVLADAFDSFSSVSIERYAAVLEEILGVLTLVSPLGEEGKSKLGSAASLRCMVWFLNGKDLSAKQNAALLLKERPVNALAKTGGVSEGLVNMIRNPIGPTPTKASLRTIFHLVSSSVDKERIGQRFVELGLVQLLLDTLVDADRGISEKALGVLDCLCDCVEGKKLAKANALIMPVTVKKILRVSELASEFAVSLLWKLCDKEDEGILIEAIQVGAFQKLLVLLQVGCGESTKEKATELLKLLHGYKSRAECVDSSLDLKYLKKPY 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01103 433 CDD RING-Ubox_PUB 32 84 IPR045210 -
Bach11g01103 433 ProSiteProfiles U-box domain profile. 30 104 IPR003613 GO:0004842|GO:0016567
Bach11g01103 433 SUPERFAMILY ARM repeat 152 400 IPR016024 -
Bach11g01103 433 FunFam RING-type E3 ubiquitin transferase 31 102 - -
Bach11g01103 433 Gene3D - 119 417 IPR011989 -
Bach11g01103 433 Pfam U-box domain 32 102 IPR003613 GO:0004842|GO:0016567
Bach11g01103 433 SUPERFAMILY RING/U-box 29 107 - -
Bach11g01103 433 PANTHER WDSAM1 PROTEIN 29 420 IPR045185 GO:0061630
Bach11g01103 433 SMART Ubox_2 34 97 IPR003613 GO:0004842|GO:0016567
Bach11g01103 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 108 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01103 Bach-Chr11 10045008 10046482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01103 26 433 U-box Gene Family AT5G37490 48.916 3.69e-130 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01103 - - qsa:O6P43_014260 596.275