Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01102 ATGTCTTTCTCCCTCATCGAAGCTTGCAGAAAGAGAAAACGAAGGCCCAAAGTTTTCAAGTTTCACTCCTTCTCCGACCCTGGTTGCCCTATCAACCCCAAAGGACCTTTCCGAGATAACATCCGCCTCTTTCTTCAAGAATGCGCAGAGCTCGAAGACTACTGTGTGCATGGCATGCCGTTGTGGTGCACCCTCCTTATCCACGAGAAATCAAGCTTCATGTTCCCTCTTTACACCGTCGAAGAGAACGTTTATCAATCTTTGCATCCCTTCTGCGACCATTGCCGATGTGCAGGTTGGAGGGGCCATTTTGTCTCGAAGAGAAGGTACCATTTCATAATTCCAATCGACGATGGATGGCATAAACCCTTAGGTGATGGCGATCTTGATAATCATACTCATCTCTTGCACGGGATGATTCACTGCAATGGGTATGGGCATTTGCTCTGTATTAATGGGATCGAAGGGGGTTCAAAACTCCTTAGTGGCAGAGAGATCATGGACCTCTGGGACAGAATCTGCACAAATCTTCGAACCAGTAAAATCGCAGTTGAAGATGCCTCAAAGAAAAGGTCTATGGATCTTCGTTTACTTCATGGAGTAGCTTATGGACATTCTTGGTTTGGTAGGTGGGGTTACAGATTCAGTCGTGGAAGCTTTGGGGTGACAGACCACAATTACAATAAAGCAATTGATGTTGTTGGTTTTTTGGAGCTTGATAAGGTCATACAAGATTTTAGTGAGAAAAATTGTAACAAAGAGATCAAACAAATAACTCGTTACTACCGAGATATGAGTGAAACCCCATTGATCACAGTGAGGGATCTTCTTAGGTTTATGCTCACTGTCAAGTCTCGTGCCCCTGCAGCTAAGAAAGTTGTCACCTTTACTTCTGGTTCGTTCTCAGTTTCTTGCTCTAAGAACTCAACCAGAAATCCTCTGCCAAACAAGCCAAACCCAATCAAGGAAAAAACTGCCAGGTATAAAAAGTTCAGTACAGCAGTGGCTAATATGGATAGCAGGTGGCCTACAAGGAGATTAGAATATGCAGCTCAAGTGATTGTTGATGCACTGAAAGAGCACAAAGCTGCCAATCCAGGTTCTTGTGGGATGACAAGGCAAGATGTACGTGATGCAGCAAGGCAACATATTGGTGACACAGGTTTGCTGGATAATGTGCTGAAATCACTGAATAATGTGATTGTTGGAAACTCTGTTGTTTGCCGCATGGTGAACCCAGTAACTAGGATCCTGGAATACACCATTCATGAGGTTGAGAATGGGGTTAAAGTTTCAGAAGTGGAGCCTGAGGTGAAGGTCCTTGTAGAGCCCCCATCAGAGTATACTCAGGTGCCTGGAGTTGATGTTTACAATGACGTAATTTACCTGTACAAGAATGTGATACTGGGATATCCAGATTCAGAACTAGTGCAATTGGCAGTTCAGACAATTCTTGATAGCAGGCATTTTGTGAAGGAATGGATATTACATGATGAAATGGAGCAGTTATTGACATTCATTTGCCGCTTGAAACCAAATTTTGATGACACGAGATCTCAATCGGACATAGACATGGCACCAGGTGAGATTGTCATGGTTCCACTGCATGCAACGGTTAGAGACTTGAAGCAAGCAGCTGAGGGAGCTCTGAGGGACACTTACTGCATTGCAGAGAAGCTTATGGTGACAGATATAAAAGAGTTGGATGAAGTCAGTGATGAGGAATTGCTGTTTGGTGTGCTTCAGTCAGGTGTGGAGCTTTGTGTGAGGGGAATGGGTATAGATTTGGGTACTCCATTGAAGTACCAGGGTGGTGTTGATAATTGGAAAGTCAGGTGTGAATGTGGAGCTCAAGATGATGATGGGGAGCGAATGGTGGCATGTGACATTTGTGAGGTATGGCAGCACACTCGCTGCTGTGGCATAGAGGATTCTGAGACAGTGCCACCACTGTTTGTGTGCTCAGGGTGCTGTGATTCACTAGTACCTCCGAGGATTGACTGTCCCTTTACAGTGGATTATGCTGATCTGACTAGCCCAACGCCTAATCACTTGCTGGAGTATCAGTATGGTTATTGA 2079 0.4468 MSFSLIEACRKRKRRPKVFKFHSFSDPGCPINPKGPFRDNIRLFLQECAELEDYCVHGMPLWCTLLIHEKSSFMFPLYTVEENVYQSLHPFCDHCRCAGWRGHFVSKRRYHFIIPIDDGWHKPLGDGDLDNHTHLLHGMIHCNGYGHLLCINGIEGGSKLLSGREIMDLWDRICTNLRTSKIAVEDASKKRSMDLRLLHGVAYGHSWFGRWGYRFSRGSFGVTDHNYNKAIDVVGFLELDKVIQDFSEKNCNKEIKQITRYYRDMSETPLITVRDLLRFMLTVKSRAPAAKKVVTFTSGSFSVSCSKNSTRNPLPNKPNPIKEKTARYKKFSTAVANMDSRWPTRRLEYAAQVIVDALKEHKAANPGSCGMTRQDVRDAARQHIGDTGLLDNVLKSLNNVIVGNSVVCRMVNPVTRILEYTIHEVENGVKVSEVEPEVKVLVEPPSEYTQVPGVDVYNDVIYLYKNVILGYPDSELVQLAVQTILDSRHFVKEWILHDEMEQLLTFICRLKPNFDDTRSQSDIDMAPGEIVMVPLHATVRDLKQAAEGALRDTYCIAEKLMVTDIKELDEVSDEELLFGVLQSGVELCVRGMGIDLGTPLKYQGGVDNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIEDSETVPPLFVCSGCCDSLVPPRIDCPFTVDYADLTSPTPNHLLEYQYGY 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01102 692 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 600 661 IPR013083 -
Bach11g01102 692 CDD PHD_MMD1_like 613 657 - -
Bach11g01102 692 SUPERFAMILY FYVE/PHD zinc finger 601 661 IPR011011 -
Bach11g01102 692 ProSitePatterns Zinc finger PHD-type signature. 613 657 IPR019786 -
Bach11g01102 692 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 12 663 - -
Bach11g01102 692 SMART PHD_3 612 658 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01102 Bach-Chr11 10028006 10030597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01102 10 663 PHD Transcription Factor Family AT5G22260 32.904 6.03e-118 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01102 K26271 - qsa:O6P43_014263 991.104