Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01101 ATGGTTCGGAAGAAGAGTGCAAAGCTGGTGGAGAGGGAAAAGGAGAAGGAAACGCAGTCGTCTTCGCCATCGCAAACGTCGACGTCGTCGGATGAGAGAGAGTATGAGGTGGAGGATTTGAGGGACCGGTTGAAATCGTCGCGAGGAAGCCGGTTTAATTTGATAGAGAACGAGTTGACTCGTCAGAAGTTCGGTCCCCAAGCTGTCTTCAACGGCTTTAGAGTCTTCTCCGAGGACTCCGTTATTCGTCCCGATAACAGGTGGTATCGGGCATGGATAAAATTCATATTGTTGTGGGCAATGTACTCATCCTTCTTCACCCCAATGGAATTTGGATTTTTTCGCGGGCTGCCTGAGAATCTCTTTATACTAGACATCATTGGACAAATAGCTTTTCTTGTAGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGACAGTCAGACTTACCGTATGGTCTATAAGCGCACCCCTATAGCTCTGCGGTATCTAAAATCTAGTTTTATCTTTGATCTTCTCGGATGTTTGCCTTGGGACATCATTTACAAGGCTTCTGGAAGAAGAGAGGGAGTAAGATACCTTTTGTGGATCAGATTATATCGGGTGCGCAAAGTCACTGATTTTTTCCAGAGGATGGAGAAGGATATACGTATCAATTACATGTTTACAAGGATTTTGAAACTTTTGGTCGTTGAACTGTATTGCACCCACACGGCAGCCTGCATTTTCTACTTTTTGGCTACAACACTGCCACCTTCCCAAGAGGGGTACACATGGATAGGAAGTTTAAAGTTGGGTGACTATAGTTACTCACATTTCAGGGAAATTGATCTTTGGAAACGCTACACAACATCTCTATATTTTGCTATTGTTACCATGGCTACTGTAGGCTATGGAGATATACACGCTGTCAATATGAGGGAGATGATATTCATAATGATATACGTTTCTTTTGACATGGTTCTTGGTGCTTATTTGATTGGAAACATGACAGCACTGATAGTCAAAGGATCAAAGACTGAAAAGTTTAGGGACAAAATGACAGATCTTATGAAATATATGAATAGAAACAGACTTGGAAGGGACATCCGTGAACAAATAAAAGGCCATCTGCGCTTACGGTATGAGAGTAGCTACACTGAGGCTGCTGTCATTCAGGACATCCCCATTTCTATTCGCGCTAAGATATCCCAAACATTATATTTGCCATACATTGAAAATGTTTCTCTCTTTAAGGGTTGCAGTTCAGAATTCATCAATCAGATAGTTATTCGGGTCCATGAAGAATTTTTCCTACCAGGGGAAGTGATAATGGAACAAGGAAATGCCGTAGATCAACTATACTTTGTCTGTCATGGTGTGCTGGAGGAAGTAGGCATATGTGAAGATGGATCCGAAGAGACTGTTTCACAACTACGACGTAACAGTTCATTTGGAGAAATATCCATTCTCTGTAACATTCCTCAGCCATATAGTGTTCGGGTTTGTGAACTATGTAGGCTTCTGCGGCTTGATAAGCAATCATTTACAAATATTCTTGACATATACTTCTATGACGGGAGGAAAGTATTAAACAATCTTCTAGAGGGAAAAGAATCTTTTCGAGGGAAGCAATTGGCGTCAGACATCACATTTCATATTGGAAAGCAAGAAGCTGAACTTGCTTTAAAGGTCAATAGTGCAGCCTTTAATGGGGATCTGTATCAGCTAAAAAGTTTGATCCGAGCTGGAGCTGATCCCAACAAGACCGATTATGATGGAAGGTCTCCCTTGCATCTTGCTGCATCTAGAGGACATGAAGATATCACACTTTTCCTCATTCAGGAAAGAGTAGATGTCAATATTACAGATAACTTTGGGAACACACCCTTACTTGAAGCTGTTAAGAACGGACATGATCGAGTTGCTTCCTTCCTTGTTAAAAAAGGGGCCTCAATGAGAAGAGACAATGCTGGTAGCTTCCTATGTACAGCTGTTGCTAGGGGCGATTCAGATTATCTTCAAAGGCTTTTATCTAATGGCATGGATCCCAATTCAAAAGATTATGATTACCGAAGCCCTCTTCATGTTGCTGCTGCTGAAGGTTTACTCTTCATGGCAAAGTTGCTATTAGAAGCTGGAGCTAGTGTTTTCGCCAAAGATAGATGGGGAAATACTCCACTTGATGAAGCCCGGATGTCTGGAAATAAGAATCTCATCAAGCTACTGGAAGATGCAAAGTCAACTCAGTTGTCAGAATTCCCATATCCCTCCACACAATTATCAGATAAAAAGCACCGGAAGAAATGCACAGTGTTCCCTTTCCATCCATGGGATCCAAAAGAACATAGAAGACACGGAATTGTACTATGGGTTCCACTCACCATTGAAGAACTTATCAATTCAGCAGCAGAGCAGCTTGAACTTTCTGGTAGTTGTTGTATTTTATCTGAAGATGCTGGTAAAATCATTGATGTGGATATGATTACGAATGATCAAAAGCTGTATTTAGTCCACGAAACACGTTAG 2508 0.4143 MVRKKSAKLVEREKEKETQSSSPSQTSTSSDEREYEVEDLRDRLKSSRGSRFNLIENELTRQKFGPQAVFNGFRVFSEDSVIRPDNRWYRAWIKFILLWAMYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIVLQFFVAYRDSQTYRMVYKRTPIALRYLKSSFIFDLLGCLPWDIIYKASGRREGVRYLLWIRLYRVRKVTDFFQRMEKDIRINYMFTRILKLLVVELYCTHTAACIFYFLATTLPPSQEGYTWIGSLKLGDYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHLRLRYESSYTEAAVIQDIPISIRAKISQTLYLPYIENVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNAVDQLYFVCHGVLEEVGICEDGSEETVSQLRRNSSFGEISILCNIPQPYSVRVCELCRLLRLDKQSFTNILDIYFYDGRKVLNNLLEGKESFRGKQLASDITFHIGKQEAELALKVNSAAFNGDLYQLKSLIRAGADPNKTDYDGRSPLHLAASRGHEDITLFLIQERVDVNITDNFGNTPLLEAVKNGHDRVASFLVKKGASMRRDNAGSFLCTAVARGDSDYLQRLLSNGMDPNSKDYDYRSPLHVAAAEGLLFMAKLLLEAGASVFAKDRWGNTPLDEARMSGNKNLIKLLEDAKSTQLSEFPYPSTQLSDKKHRKKCTVFPFHPWDPKEHRRHGIVLWVPLTIEELINSAAEQLELSGSCCILSEDAGKIIDVDMITNDQKLYLVHETR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01101 835 PRINTS EAG/ELK/ERG potassium channel family signature 234 244 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach11g01101 835 PRINTS EAG/ELK/ERG potassium channel family signature 326 335 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach11g01101 835 PRINTS EAG/ELK/ERG potassium channel family signature 282 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach11g01101 835 PRINTS EAG/ELK/ERG potassium channel family signature 125 135 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach11g01101 835 Gene3D - 92 336 - -
Bach11g01101 835 SMART ANK_2a 586 615 IPR002110 GO:0005515
Bach11g01101 835 SMART ANK_2a 650 679 IPR002110 GO:0005515
Bach11g01101 835 SMART ANK_2a 716 745 IPR002110 GO:0005515
Bach11g01101 835 SMART ANK_2a 619 648 IPR002110 GO:0005515
Bach11g01101 835 SMART ANK_2a 683 712 IPR002110 GO:0005515
Bach11g01101 835 SMART ANK_2a 551 582 IPR002110 GO:0005515
Bach11g01101 835 SUPERFAMILY cAMP-binding domain-like 338 527 IPR018490 -
Bach11g01101 835 MobiDBLite consensus disorder prediction 1 39 - -
Bach11g01101 835 ProSiteProfiles Ankyrin repeat profile. 650 682 IPR002110 GO:0005515
Bach11g01101 835 SUPERFAMILY Voltage-gated potassium channels 84 335 - -
Bach11g01101 835 MobiDBLite consensus disorder prediction 1 19 - -
Bach11g01101 835 Gene3D - 543 650 IPR036770 -
Bach11g01101 835 FunFam Potassium channel KAT2 398 535 - -
Bach11g01101 835 PRINTS Ankyrin repeat signature 699 713 IPR002110 GO:0005515
Bach11g01101 835 PRINTS Ankyrin repeat signature 587 602 IPR002110 GO:0005515
Bach11g01101 835 ProSiteProfiles cAMP/cGMP binding motif profile. 410 530 IPR000595 -
Bach11g01101 835 ProSiteProfiles KHA domain profile. 762 835 IPR021789 -
Bach11g01101 835 Pfam Ankyrin repeats (3 copies) 561 647 IPR002110 GO:0005515
Bach11g01101 835 Pfam Ankyrin repeats (3 copies) 656 736 IPR002110 GO:0005515
Bach11g01101 835 Pfam KHA, dimerisation domain of potassium ion channel 761 830 IPR021789 -
Bach11g01101 835 Gene3D Jelly Rolls 394 531 IPR014710 -
Bach11g01101 835 Pfam Cyclic nucleotide-binding domain 430 514 IPR000595 -
Bach11g01101 835 ProSiteProfiles Ankyrin repeat profile. 619 651 IPR002110 GO:0005515
Bach11g01101 835 SUPERFAMILY Ankyrin repeat 559 738 IPR036770 -
Bach11g01101 835 FunFam Gated outwardly-rectifying K+ channel 625 751 - -
Bach11g01101 835 Gene3D Helix hairpin bin 337 393 - -
Bach11g01101 835 Pfam Ion transport protein 90 335 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach11g01101 835 ProSiteProfiles Ankyrin repeat profile. 586 618 IPR002110 GO:0005515
Bach11g01101 835 PANTHER POTASSIUM CHANNEL AKT1 63 832 IPR045319 GO:0005249|GO:0006813
Bach11g01101 835 FunFam Potassium channel SKOR 90 335 - -
Bach11g01101 835 CDD CAP_ED 410 524 IPR000595 -
Bach11g01101 835 ProSiteProfiles Ankyrin repeat region circular profile. 683 715 - -
Bach11g01101 835 SMART cnmp_10 410 528 IPR000595 -
Bach11g01101 835 Gene3D - 651 746 IPR036770 -
Bach11g01101 835 ProSiteProfiles Ankyrin repeat region circular profile. 619 646 - -
Bach11g01101 835 ProSiteProfiles Ankyrin repeat region circular profile. 586 618 - -
Bach11g01101 835 ProSiteProfiles Ankyrin repeat profile. 683 715 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01101 Bach-Chr11 10015182 10022676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01101 657 736 Ion Channels AT5G37500 34.314 9.69e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01101 K21867 - gmx:100814385 1432.54