Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01084 ATGGGAAGGCAACCATGTTGTGATAAAGTGGGGTTGAAGAAGGGGCCATGGACAGCAGAAGAGGATAAGAAGCTCATTAACTTCATCCTCACCAATGGCCAATGTTGCTGGAGAGCTGTGCCTAAGCTTGCAGGGCTCTTGAGGTGTGGGAAAAGTTGCAGGCTGAGATGGACAAATTACCTAAGACCAGACTTAAAGAGAGGCCTTTTATCAGAATATGAAGAGAAAATGGTCATTGATCTCCATGCTCAACTTGGCAACAGATGGTCCAAGATTGCTTCTCAACTCCCTGGAAGAACTGATAATGAGATCAAGAACCATTGGAATACCCACATCAAGAAGAAACTCAAGAAAATGGGGATTGATCCTGTCACCCACAATCCACTCCCTTCTTGTCCAACTGAGCAACCTCAAACCCCACAAAAACAACGACAGCAACAACAAAACCAATTACAAGAAGAACAACCTTTGACAGTTAACCACAATCTTGAACCTGAAAATGACCAAAACAAAGAGGCATCAGAGAAGTCAGAGAGCTCATATGAGTCATCAACCATAACAGAAGCCATAGAGGAAGACATAATCATGACACCCCCATTTGACACAATGGAGGCCATAAATAATGGGTTCTGCACTGATGAGGTCCCAATAATTGAACCCCATGAGATCCTGATGCCATGTGCTTCTGCTGCAGCTGCTGTTTCATCATCAACCTCTTCTTCTTCATCTTCTTCCTCTTCCAGCTTCCTTCAAGACCTGCAGCTGCCAGATTTTGAGTGGTCCTGCAATTACAGTGACAGTAATATAATTGACAGTTACATGAACAATGGCAGTGTAGGCCTGTGGGATGATGACTTCATTAGTAATTTGGATTTACTGATTAATGAAGATATTGTTGATGGTGACAGAAAGCAAGTCATTGATTCTCCTCTTAATCAGTACCCAAGAATGGTTGTGGATCAAGCATCATGGGCATATGGCTTATTTTGA 990 0.4283 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASQLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHNPLPSCPTEQPQTPQKQRQQQQNQLQEEQPLTVNHNLEPENDQNKEASEKSESSYESSTITEAIEEDIIMTPPFDTMEAINNGFCTDEVPIIEPHEILMPCASAAAAVSSSTSSSSSSSSSSFLQDLQLPDFEWSCNYSDSNIIDSYMNNGSVGLWDDDFISNLDLLINEDIVDGDRKQVIDSPLNQYPRMVVDQASWAYGLF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01084 329 FunFam MYB transcription factor 11 67 - -
Bach11g01084 329 FunFam Myb transcription factor 71 133 - -
Bach11g01084 329 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach11g01084 329 CDD SANT 16 61 IPR001005 -
Bach11g01084 329 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach11g01084 329 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach11g01084 329 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Bach11g01084 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach11g01084 329 SMART sant 13 63 IPR001005 -
Bach11g01084 329 SMART sant 66 114 IPR001005 -
Bach11g01084 329 PANTHER F14D16.11-RELATED 1 263 - -
Bach11g01084 329 Gene3D - 11 67 - -
Bach11g01084 329 MobiDBLite consensus disorder prediction 129 164 - -
Bach11g01084 329 CDD SANT 74 112 IPR001005 -
Bach11g01084 329 Gene3D - 70 157 - -
Bach11g01084 329 MobiDBLite consensus disorder prediction 123 191 - -
Bach11g01084 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach11g01084 329 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01084 Bach-Chr11 9820418 9822355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01084 1 329 MYB Transcription Factor Family AT5G16600 47.107 8.27e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach11g01084 Myb_DNA-binding 9.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01084 K09422 - gmx:100803624 431.409