Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01044 GGATCTACATGTCTACGGGGACATCTTCGTATTGGTGTTACCGATGCAGTCGATTTGTTAGGGTATGGAGGCAGGACATGGTGGTTTGCCCTGACTGCGACAGTGGATTCGTTGAAGAGATCGAGCATCCAGCGCGGTCCATGCACGTGGATGCGCGGCGGCGGAGGTTTCCTGCTGGGGCGATGTATATGATGGGCCACCGTCCCACTTCTGATCAGAATTCGCGCCCTGCACTACGGAGGACCCGCAGGAACGGTGGTGATCGTTCCCCTTTCAATCCGGTCATCGTGCTCCGTGGATCTTCTGATGGGACGGGTAACGAGGGTGGAGAGGGTCGGGGGTTTGAGCTTTATTACGATGATGGTGCCGGTTCCGGGCTCAGACCCTTGCCTCCAACCATGTCGGAATTTCTGTTGGGATCTGGGTTTGATAGGCTTTTGGAGCAGCTTTCCCAGATGGAAATCAACAGTATTGGACGATACGAGCACCCTCCAGCATCAAAAGCAGCGATTGATTCATTGCCTACGATTGAAATTGATGATAACCATCTAGCAATGGAGTCGCACTGTGCAGTTTGCAAAGAAGCTTTTGAATCAGGCACTGCAGCTCGGGAAATGCCTTGTAAGCATATTTACCACTCAGAATGCATTCTACCATGGCTTGCTCTTCGCAATTCCTGCCCAGTTTGCCGCCACGAGTTGCCGGCTGATACGCAGAGTGCGCCAGCAACAGGGCATTCCCTTTCTTGGAACGATGAAGAGAATGTGGGATTGACAATTTGGAGGCTTCCGGGTGGTGGGTTTGCAGTGGGAAGGTTTTCTGGTGGAAGAAGGGGTGCTGAGAGGGAGCTACCCGTAGTTTACACAGAAATGGATGGTGGGTTTAACAATGGTGGTGAGCCAAGGAGGGTTTCGTGGTCGTCTAGAGGGAATAGAGGGAGGGAGAGTGGTGGATTGCGCAGAATGTTTCGGAGTTTGATGGGCTGCTTCACGAGAGGAGTTCAATCTCAGCCTTCTACTTCTAGTTCTAGTGCAGAAGCTAGACCTATGAGGAGTTCTTCTCATAATCTCAATAGAAATTCCTCTACACGTGCTCGTAGGACTTGGTCAATGGATGTAAACAATGGATGGTAAATGTCTACGGGGACATCTTCGTATTGGTGTTACCGATGCAGTCGATTTGTTAGGGTATGGAGGCAGGACATGGTGGTTTGCCCTGACTGCGACAGTGGATTCGTTGAAGAGATCGAGCATCCAGCGCGGTCCATGCACGTGGATGCGCGGCGGCGGAGGTTTCCTGCTGGGGCGATGTATATGATGGGCCACCGTCCCACTTCTGATCAGAATTCGCGCCCTGCACTACGGAGGACCCGCAGGAACGGTGGTGATCGTTCCCCTTTCAATCCGGTCATCGTGCTCCGTGGATCTTCTGATGGGACGGGTAACGAGGGTGGAGAGGGTCGGGGGTTTGAGCTTTATTACGATGATGGTGCCGGTTCCGGGCTCAGACCCTTGCCTCCAACCATGTCGGAATTTCTGTTGGGATCTGGGTTTGATAGGCTTTTGGAGCAGCTTTCCCAGATGGAAATCAACAGTATTGGACGATACGAGCACCCTCCAGCATCAAAAGCAGCGATTGATTCATTGCCTACGATTGAAATTGATGATAACCATCTAGCAATGGAGTCGCACTGTGCAGTTTGCAAAGAAGCTTTTGAATCAGGCACTGCAGCTCGGGAAATGCCTTGTAAGCATATTTACCACTCAGAATGCATTCTACCATGGCTTGCTCTTCGCAATTCCTGCCCAGTTTGCCGCCACGAGTTGCCGGCTGATACGCAGAGTGCGCCAGCAACAGGGCATTCCCTTTCTTGGAACGATGAAGAGAATGTGGGATTGACAATTTGGAGGCTTCCGGGTGGTGGGTTTGCAGTGGGAAGGTTTTCTGGTGGAAGAAGGGGTGCTGAGAGGGAGCTACCCGTAGTTTACACAGAAATGGATGGTGGGTTTAACAATGGTGGTGAGCCAAGGAGGGTTTCGTGGTCGTCTAGAGGGAATAGAGGGAGGGAGAGTGGTGGATTGCGCAGAATGTTTCGGAGTTTGATGGGCTGCTTCACGAGAGGAGTTCAATCTCAGCCTTCTACTTCTAGTTCTAGTGCAGAAGCTAGACCTATGAGGAGTTCTTCTCATAATCTCAATAGAAATTCCTCTACACGTGCTCGTAGGACTTGGTCAATGGATGTAAACAATGGATGGTAACTTTTGGGGGAGAGCCTAGAATTGAGAAATGAAATTTGAGAATGCAATACAACTGAGTTAAAGTTCTAATCTTTGCTTCTGGGTTCCCTAAATGGGACCTTGGAACGGTTTGTTAGAGTCATATATATTGGTCAGTGTACATAATGAGATTGAATTGAAAATGCATTGCAAACAGATATTGTAATTCGCCAATCCTCAGTTGCAGAAGTTTAGTGAATTGTAG 2481 0.5002 MSTGTSSYWCYRCSRFVRVWRQDMVVCPDCDSGFVEEIEHPARSMHVDARRRRFPAGAMYMMGHRPTSDQNSRPALRRTRRNGGDRSPFNPVIVLRGSSDGTGNEGGEGRGFELYYDDGAGSGLRPLPPTMSEFLLGSGFDRLLEQLSQMEINSIGRYEHPPASKAAIDSLPTIEIDDNHLAMESHCAVCKEAFESGTAAREMPCKHIYHSECILPWLALRNSCPVCRHELPADTQSAPATGHSLSWNDEENVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNGGEPRRVSWSSRGNRGRESGGLRRMFRSLMGCFTRGVQSQPSTSSSSAEARPMRSSSHNLNRNSSTRARRTWSMDVNNGW 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01044 374 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 87 232 - -
Bach11g01044 374 Pfam Protein of unknown function (DUF1117) 253 361 IPR010543 -
Bach11g01044 374 MobiDBLite consensus disorder prediction 62 107 - -
Bach11g01044 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 234 IPR013083 -
Bach11g01044 374 Pfam zinc-ribbon 7 38 IPR039525 GO:0061630
Bach11g01044 374 ProSiteProfiles Zinc finger RING-type profile. 187 228 IPR001841 -
Bach11g01044 374 MobiDBLite consensus disorder prediction 328 374 - -
Bach11g01044 374 FunFam E3 ubiquitin-protein ligase RING1-like 149 234 - -
Bach11g01044 374 Pfam Ring finger domain 186 228 IPR001841 -
Bach11g01044 374 SMART ring_2 187 227 IPR001841 -
Bach11g01044 374 SUPERFAMILY RING/U-box 167 237 - -
Bach11g01044 374 MobiDBLite consensus disorder prediction 295 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01044 Bach-Chr11 9358724 9360079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01044 126 236 C3H Transcription Factor Family AT5G01980 41.441 1.64e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01044 K11982 - qsa:O6P43_014338 583.948