Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g01019 ATGAAACCTGAACTCCTCCCGTTTACGGTGGCGCTGCTATTATGCGTAGGGTTCGGAATGTCCCTGACAAGCTGCCCCGATTGTGGGAACACTACTGTACCGTACCCACTCAGCACCGCATCCGACTGCGGTGATCCTTCCTACAAGATCCGATGCAGCTCCGGGTCGCTCATTTTCGACACGCTAAACAACTCCTACCCGATTGAATCCATCAACCCACAATCTCAACGCCTAGTGATCCAACCCGCCAGTCTCATTTCCAACACCTGCATCACTACCGATAAAATCCACCAGGGTATCCAGCTGAACAATACCCTCCCCTTCAATATCACCAGCAGCAACACCATCATGTACCTCAACTGCACCAACACCATGCTTCAATCGCCGTTAAACTGCTCTTCGGCGAGCTTGTGCCACACCTACATCAACGTCACCAGAGACGCCACATCATGCCAGGACACTGCGTTGTGCTGCACGTATAGGGCGGGTGGTTCCAGCAATTCCTACCAGATTCGTGTCAGGGATGTGGGCTGTAGCGCTTACTCCAGTTTTGTGAATTTGGACCCAACTTTGCCAGTGAACCGGTGGCCTGAACCGGGGTTGGAGATTCAGTGGGTGTCGCCGCGGGAACCTATTTGTGGGTCCCAGGCGGATTGTGATGTAGGAAACTCAACCTGTGGGTCCGATTCATCCAGTAATGGGATGAAGAGGTGCTTCTGTAACTCCGGACTAGTGTGGGACCCCATTAATGGGACGTGCACTAAAAAAATTTCGTGTCAAAGTCCTGGTGGTTGTGGCGGCTCAACGGATCATACAGCTCTAATTGCAGGTTTAGTCTGTGGGGTGGCTGCAACGCTCATCGTAGCTACCATTGCCCTTGTACTCTACAAACGCCACAAGCGCATTAAGGAAGCACGAGCACGCCTGGTCAGAGAGCGCGAAGATATTCTCAATGCCAGCGGCGGAGGCAGAGCTGCAAAGCTTTTCACAGGCAAAGAGCTCAAGAAAGCAACAAACGACTTGTCCAGAGATCGCCTTCTTGGTGCCGGTGGCTATGGCGAAGTCTACAAAGGCATCCTCGAAGACGGCACTGTCGTTGCAGTTAAATGCGCCAAGCTTGGAAATGCCAAAGGCATCGATCAAATCCTTAATGAGGTTCGCATTTTGTGCCAAGTCAACCACCGGAACCTCGTTGGCCTCCTTGGTTGCTGCGTGGAACTAGAACAGCCAACAATGGTCTACGAGTTCATAGAGAATGGCAATCTTCTTGATCATCTGCGGGGCTACAATCCCAAAGAGCGCGGCCACCTTTCCTGGATACATCGCCTTAGAATTGCCCATGACACAGCTGAAGGTCTTGCCTACCTTCACTTCTTGGCTGTGCCTCCAATATACCATAGAGATGTTAAGTCTAGCAACATTCTGCTTGATGGCAAGCTCAATGCTAAAGTTGCAGACTTTGGGTTATCTAGATTGGCCCAAACAGATTTGAGTCATATCTCAACTTGTGCTCAGGGGACTCTTGGGTATCTTGATCCTGAATATTACAAGAGCTACCAGTTGACGGATAAGAGTGATGTTTATAGCTTCGGAGTGGTGTTGTTGGAGCTGCTGACTGCCCAGAAGGCCATTGATTTTAACAGAGGAGCAGATGATGTGAACTTAGCAGTTTATGTGCAGAGGATGGTGGAGGAAGAGAAATTGATGGATGTCATTGATCCAGTGTTGAGAAATGGAGCTAACACCGTCGAGCTGGAGACCATGAAAGCTCTGGCATTTCTGGCATTGGGATGCTTGGAGGAACGTAGACAGAATCGGCCTTCAATGAAAGAAGTAGCAGAGGAGATTGAATATATTATTAGTATTGCCACAGCAAAGGATGCAGAGAAGTAG 1893 0.4987 MKPELLPFTVALLLCVGFGMSLTSCPDCGNTTVPYPLSTASDCGDPSYKIRCSSGSLIFDTLNNSYPIESINPQSQRLVIQPASLISNTCITTDKIHQGIQLNNTLPFNITSSNTIMYLNCTNTMLQSPLNCSSASLCHTYINVTRDATSCQDTALCCTYRAGGSSNSYQIRVRDVGCSAYSSFVNLDPTLPVNRWPEPGLEIQWVSPREPICGSQADCDVGNSTCGSDSSSNGMKRCFCNSGLVWDPINGTCTKKISCQSPGGCGGSTDHTALIAGLVCGVAATLIVATIALVLYKRHKRIKEARARLVREREDILNASGGGRAAKLFTGKELKKATNDLSRDRLLGAGGYGEVYKGILEDGTVVAVKCAKLGNAKGIDQILNEVRILCQVNHRNLVGLLGCCVELEQPTMVYEFIENGNLLDHLRGYNPKERGHLSWIHRLRIAHDTAEGLAYLHFLAVPPIYHRDVKSSNILLDGKLNAKVADFGLSRLAQTDLSHISTCAQGTLGYLDPEYYKSYQLTDKSDVYSFGVVLLELLTAQKAIDFNRGADDVNLAVYVQRMVEEEKLMDVIDPVLRNGANTVELETMKALAFLALGCLEERRQNRPSMKEVAEEIEYIISIATAKDAEK 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g01019 630 Pfam Protein tyrosine and serine/threonine kinase 343 615 IPR001245 GO:0004672|GO:0006468
Bach11g01019 630 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Bach11g01019 630 SMART serkin_6 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g01019 630 Pfam Wall-associated receptor kinase galacturonan-binding 25 80 IPR025287 GO:0030247
Bach11g01019 630 Gene3D Transferase(Phosphotransferase) domain 1 417 629 - -
Bach11g01019 630 FunFam Wall-associated receptor kinase-like 20 417 629 - -
Bach11g01019 630 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Bach11g01019 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Bach11g01019 630 FunFam Wall-associated receptor kinase-like 20 303 416 - -
Bach11g01019 630 Gene3D Phosphorylase Kinase; domain 1 303 416 - -
Bach11g01019 630 CDD STKc_IRAK 347 617 - -
Bach11g01019 630 ProSiteProfiles Protein kinase domain profile. 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g01019 630 SUPERFAMILY Protein kinase-like (PK-like) 325 616 IPR011009 -
Bach11g01019 630 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 23 619 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g01019 Bach-Chr11 9176610 9179498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g01019 25 629 Receptor kinase-like Gene Family AT5G02070 52.827 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bach11g01019 PK_Tyr_Ser-Thr 4.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g01019 - - gmx:100305415 1012.68