LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach11g01002	ATGATTACTCAGATGTATTCCAGCCATGATCGAAGGACCTACATTGTATACATGGGTGAGATTCCAAAAGGCATGAATTCAACATCGTTACAGTCACTTCACAAGAACATGGCTCAAAGGGTCCTTTGCAGCTATGTCAAGAGCTTCAATGGATTTGTTCTAAAGCTAACAGAACAGGAAGCAGAAAGAATGGCAGATATGGATGGAGTGGTCTCTCTTTTGCCAAACCAACCGAGCCAACTCCAAACAACAAGATCATGGGACTTCATAGGTTTGTCCGAGCATGTCAAAAGGACAAGCAAGGAGAGTGACATAATTGTGGGAGTGATTGATTCAGGGATTTGGCCTGAGTCTGACAGCTTCAGTGATGAAGGATATGGTCCACCTCCTAGCAAATGGAAGGGTTCCTGTCATAACATCACCTGCAATAACAAAATAATTGGAGGCAAATGTTTTGCCATTGATCACATATTTGGAAAAGATGATATCATTTCTCCAAGAGATTCAAATGGGCATGGGACACACTGTGCATCTATTATAGCTGGAAATTCTGTTAGCTCTGCAAGTCTTCAGGGCCTTGGCTTGGGGACTGCAAGAGGAGCAGTTCCATCAGCACGTATTGCTGTTTATAAAGCTTGCTGGTTTCCTCAACCTTGCGATGTTGCTGACATCCTTGCATCATTTGATGAAGCAATTGCTGACGGCGTAGACATAATTTCCGCTTCAATTGGAGCTTTCTTTCCCACCAAATACTTGGATGATCCAATTGATATAGGAGCTTTCCATGCGCTTAAAAAGGGCATATTGACATTGAATTCTGCTGGCAACTCAGGCTCACAGCTTTACACCATGTTCAGATTTGCACCATGGGTGCTTTCTGTGGCTGCTAGCACCATTGACAGAAAATTCTTTACCAAGGTTCAATTGGGAAATGGCATGGTTTATGAGGGAGTTTCAGTAAATACATTTGATCTCGAAAATAAAATGTATGAATTGATTTATGCTGGAGATGCACCCAACATCACCGGGGGATATAATTTCTCTACGTCAAGGTTATGTTCGGAAAACTCTTTGGATAACAATCTGGTGAAGGGAAAAATAGTCCTGTGTGATAGCTTTTTGGACACTACAGGACTTCTGTCTGGAGCAGCTGGTGTTTTAGTGGCAAACACAGACCCAAAAGATGCAGCCTTTTCATATGCCTTGCCTACCACTCACCTTAGTCTAAAGGACAGTATACTCATAAACTCCTACATGAATTCAACAAGTAATCCTACTGCAACTATATTGAAGAGTAATGTTGGGCATGATTCATCAGCACCTTACATAGTTTCTTTCTCATCAAGAGGGCCAAATCCATTTGCACCTGACATTCTTAAGCCGGATTTAGCTGCTCCAGGAGTTGACATTCTAGCTGCATGGTCTCCCCTTGGCTCTCCCTCAGGATTCACAGGTGATAAGAGAGCAGTACACTACAATATAATGTCTGGTACTTCAATGTCCTGCCCTCATGCTGCTGGGGCAGCCGCCTACATAAAATCATTTCATTCCAACTGGTCCTCTGCTGCAATTAAATCTGCCATGATGACCACAGCTAACCCCATGAGTCCTATACTCAATCCTGAAGCTGAATTTGCTTATGGTTCTGGGCAGATTGATCCTGTCAAGGCTGTGAATCCAGGTTTAGTATACGATGCCAGTGAGGATGATTATGTCAAGTTTATGTGTGGACAAGGTTATGATGCCAGAAAGCTACAGAGTGTTAGTGGAGATAGTAGCAGTTGCAGGGAAGGCAATAATGGCACTGTTTGGGATCTGAATCAGCCTTCATTTGCTCTTTCTGCAACAATCTCAGCTAGCATTGGTCCTGTTGTTTACCGCCGAACTGTTACAAATGTTGGATCAGCAACATCTACTTACAAAAAGCCAAAGTGA	1935	0.4289	MITQMYSSHDRRTYIVYMGEIPKGMNSTSLQSLHKNMAQRVLCSYVKSFNGFVLKLTEQEAERMADMDGVVSLLPNQPSQLQTTRSWDFIGLSEHVKRTSKESDIIVGVIDSGIWPESDSFSDEGYGPPPSKWKGSCHNITCNNKIIGGKCFAIDHIFGKDDIISPRDSNGHGTHCASIIAGNSVSSASLQGLGLGTARGAVPSARIAVYKACWFPQPCDVADILASFDEAIADGVDIISASIGAFFPTKYLDDPIDIGAFHALKKGILTLNSAGNSGSQLYTMFRFAPWVLSVAASTIDRKFFTKVQLGNGMVYEGVSVNTFDLENKMYELIYAGDAPNITGGYNFSTSRLCSENSLDNNLVKGKIVLCDSFLDTTGLLSGAAGVLVANTDPKDAAFSYALPTTHLSLKDSILINSYMNSTSNPTATILKSNVGHDSSAPYIVSFSSRGPNPFAPDILKPDLAAPGVDILAAWSPLGSPSGFTGDKRAVHYNIMSGTSMSCPHAAGAAAYIKSFHSNWSSAAIKSAMMTTANPMSPILNPEAEFAYGSGQIDPVKAVNPGLVYDASEDDYVKFMCGQGYDARKLQSVSGDSSSCREGNNGTVWDLNQPSFALSATISASIGPVVYRRTVTNVGSATSTYKKPK	644

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach11g01002	644	Gene3D	-	300	436	-	-
	Bach11g01002	644	ProSitePatterns	Serine proteases, subtilase family, serine active site.	497	507	IPR023828	-
	Bach11g01002	644	Pfam	Subtilase family	103	550	IPR000209	GO:0006508\|GO:0008236
	Bach11g01002	644	SUPERFAMILY	Subtilisin-like	81	562	IPR036852	GO:0004252\|GO:0006508
	Bach11g01002	644	Gene3D	Peptidase S8/S53 domain	104	571	IPR036852	GO:0004252\|GO:0006508
	Bach11g01002	644	ProSiteProfiles	Serine proteases, subtilase domain profile.	86	558	-	-
	Bach11g01002	644	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	172	182	IPR022398	-
	Bach11g01002	644	CDD	PA_subtilisin_like	307	429	-	-
	Bach11g01002	644	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	14	641	IPR045051	-
	Bach11g01002	644	Gene3D	-	575	643	-	-
	Bach11g01002	644	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	2	82	IPR037045	-
	Bach11g01002	644	PRINTS	Subtilisin serine protease family (S8) signature	102	121	IPR015500	-
	Bach11g01002	644	PRINTS	Subtilisin serine protease family (S8) signature	496	512	IPR015500	-
	Bach11g01002	644	PRINTS	Subtilisin serine protease family (S8) signature	168	181	IPR015500	-
	Bach11g01002	644	Pfam	Peptidase inhibitor I9	13	81	IPR010259	-
	Bach11g01002	644	CDD	Peptidases_S8_3	80	533	IPR034197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach11g01002	Bach-Chr11	8987135	8990873	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach11g01002	30	641	Subtilisin-like Serine Gene Family	AT5G59190	49.920	0.0	588

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach11g01002	-		-	gmx:100800042	859.366