Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00988 ATGACCCAAGAGGACCGCGCTGGCTCTCCCTCCGGCGATGCTGCTCACAATGGCATCGCCGATTCTGAACTCGCTAGCGGTGACGCCGAGTTGTCGGGACTTGGGGACGGAAACGTTGCCGGTAGAGTGAAGGGACCCTGGTCACCTGAGGAGGACGCCGTTCTCGGTCAATTGGTGAGCAAGTTTGGGGCCAGGAATTGGAGCATGATTGCCCGAGGGATACCTGGTAGGTCCGGCAAGTCGTGCCGTCTCCGATGGTGTAATCAGCTCGACCCTTGTGTTAAACGCAAACCTTTTACTGAGGAAGAGGATCACATTATAGTTTCTGCCCATGCCATCCATGGAAACAAATGGGCAGCAATTGCAAGGCTTCTTCGAGGTAGAACAGATAATGCTATCAAGAACCATTGGAATTCTACACTGAAGCGCAGGTGTATGGAGTTGGGAAGATATGTCCCAGCACATGCTGATGTGATGGAAGATGGAAACCTTGACAAAACAAAGGCGTCGTCTGAAGAAACCATGTCAATTGGGGATAACAATTCACTTAAAACACATACAGAAGTGAGAAATGTCATGATGGCTAATGGAATTAGGCACCCTGAAGAAAATTCTCAAAGAAAAGATACCAATGTGGTGGAGGAACATCCTACACTTTTTCGACCAGTAGCACGTGTTAGTGCATTTAGTATTTATAATCCTCCGAACAGGCCAACAACTGGGTCTACAAATTTAAAGATGCTCCCAATGCAGGGCCCTTTGATGCAGCCATCCAAAGCAGAAATAGGAACCTGCAAGCTATTTGATGATGTTGGCTTTGATCCTATGGTTCCATCAGAATGTGGCCATGGTTGCTGTGCAACAGATTCAACGGGAAGCCATTCTCCTGGTTCACTATTAGGTCCTGAGTTTGTTGACTATTTGGAGTCCCCTCCTTTATCAAGTCATGAATTGAACTCTATAGCCACAGATTTGAACAATATTGCTTGGATCAAGAGTGGCCTTGAGAATCATAGTGCCAGGGTAACAGAAAATCCAGCAAATTTTCCATCATCACAAGGGGCAACCACTGCTTCACAAACAGACTTTTCAGACTACATGCACTTTCAAGGAGCAAGCAAGTTTTTGGGTCCAATGAAAGGAGTGTTGCCTACGCAGATGCCTAGACAACCTTTTGCTATGCCAGCAGAAGTTTGATGCTTGCGTCATGTTCATGGTGGGTAGATGTGAAGTACAAGTTGGTTTTTTAATTGGCAATCTGACCTTGGAGGGCAATGATTTTATTTTCGGAGTAACCCTTCCTCATCGAGGTGAAGATATATATATATATATATATATACACACACATATATTTAGCAATTTGATTTAGTAAACAGTAACGGAATACTTTTTGTTCTTAGCATTTGTCCCTCTATATATAATATCAGTATCATCACAGCACCA 1443 0.4456 MTQEDRAGSPSGDAAHNGIADSELASGDAELSGLGDGNVAGRVKGPWSPEEDAVLGQLVSKFGARNWSMIARGIPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDHIIVSAHAIHGNKWAAIARLLRGRTDNAIKNHWNSTLKRRCMELGRYVPAHADVMEDGNLDKTKASSEETMSIGDNNSLKTHTEVRNVMMANGIRHPEENSQRKDTNVVEEHPTLFRPVARVSAFSIYNPPNRPTTGSTNLKMLPMQGPLMQPSKAEIGTCKLFDDVGFDPMVPSECGHGCCATDSTGSHSPGSLLGPEFVDYLESPPLSSHELNSIATDLNNIAWIKSGLENHSARVTENPANFPSSQGATTASQTDFSDYMHFQGASKFLGPMKGVLPTQMPRQPFAMPAEV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00988 398 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 90 IPR017930 -
Bach11g00988 398 Gene3D - 97 175 - -
Bach11g00988 398 PANTHER MYB PROTEIN-RELATED 44 202 - -
Bach11g00988 398 CDD SANT 98 141 IPR001005 -
Bach11g00988 398 ProSiteProfiles Myb-like domain profile. 44 90 IPR001005 -
Bach11g00988 398 MobiDBLite consensus disorder prediction 1 32 - -
Bach11g00988 398 FunFam MYB transcription factor 44 95 - -
Bach11g00988 398 CDD SANT 46 88 IPR001005 -
Bach11g00988 398 Gene3D - 43 95 - -
Bach11g00988 398 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 145 IPR017930 -
Bach11g00988 398 ProSiteProfiles Myb-like domain profile. 91 141 IPR001005 -
Bach11g00988 398 SUPERFAMILY Homeodomain-like 41 137 IPR009057 -
Bach11g00988 398 SMART sant 95 143 IPR001005 -
Bach11g00988 398 SMART sant 43 92 IPR001005 -
Bach11g00988 398 Pfam Myb-like DNA-binding domain 44 90 IPR001005 -
Bach11g00988 398 Pfam Myb-like DNA-binding domain 96 140 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00988 Bach-Chr11 8762862 8766487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00988 22 344 MYB Transcription Factor Family AT3G55730 50.737 2.49e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach11g00988 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00988 K09422 - gmx:100781228 526.554