Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00981 ATGTCTTTTATCGGCACCCAACAAAAATGCAAGGCTTGTGAGAAAACGGTCTATCCCGTTGATCAGTTGTCTACAGATGGAGCTGCTTATCATAAGGCTTGCTTCAGATGTTCTCATTGCAAAGGAACATTGAAGTTAAGCAACTATTCTTCAATGGAAGGTGTTCTTTACTGTAAGCCTCATTATGAGCAGCTCTTCAAGGAGGCAGGCAATTTCAACAAGAACTTCCAGACACGTATATGGCTAATTATCAGCATCTTCTGTTGGTTCCAGACAAGGTCACCTAGTAAAGCAGCTAGCATGTTTTCTGGGACACAAGAAAAGTGTGCTACATGTGGCAAAACTGCGTATCCATTGGAGAAGGTAACAGTGGAGGGCCAAGCCTATCACAAATCCTGTTTCAAGTGTTCACATGGTGGCTGTCCCATATCGCCATCAAATTATGCAGCCCTCGAGGGCATTTTGTATTGCAAGCACCATTTCTCCCAACTTTTTAAGGAGAAGGGGAGCTATAGTCATCTGATCAAGTCTGCATCAATGAAGCGGGCAGCAGCCTCAGTTCCAGAATCTTAA 573 0.438 MSFIGTQQKCKACEKTVYPVDQLSTDGAAYHKACFRCSHCKGTLKLSNYSSMEGVLYCKPHYEQLFKEAGNFNKNFQTRIWLIISIFCWFQTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVEGQAYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFSQLFKEKGSYSHLIKSASMKRAAASVPES 190
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00981 190 Gene3D Cysteine Rich Protein 4 74 - -
Bach11g00981 190 Gene3D Cysteine Rich Protein 103 173 - -
Bach11g00981 190 FunFam LIM domain and actin-binding 1 103 173 - -
Bach11g00981 190 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 135 174 - -
Bach11g00981 190 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 101 134 - -
Bach11g00981 190 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Bach11g00981 190 ProSiteProfiles LIM domain profile. 107 167 IPR001781 -
Bach11g00981 190 SMART lim_4 108 160 IPR001781 -
Bach11g00981 190 SMART lim_4 9 61 IPR001781 -
Bach11g00981 190 PANTHER OS06G0237300 PROTEIN 5 78 - -
Bach11g00981 190 FunFam LIM domain and actin-binding 1 4 74 - -
Bach11g00981 190 Pfam LIM domain 109 164 IPR001781 -
Bach11g00981 190 Pfam LIM domain 10 65 IPR001781 -
Bach11g00981 190 CDD LIM1_SF3 6 68 - -
Bach11g00981 190 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Bach11g00981 190 ProSiteProfiles LIM domain profile. 8 68 IPR001781 -
Bach11g00981 190 CDD LIM2_SF3 109 169 - -
Bach11g00981 190 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 76 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bach11g00981 Bach-Chr11 8695770 8697571 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Bach11g00981 LIM 4.1e-11 CL0167
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00981 K09377 - gmx:100809121 341.273