LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach11g00975	ATGTTTCTTCAGAGATTCTCTCTGCTTCTAAAAGATTGGTTTGTGCAAGAGAGTCACAGCACTGAATGGACTCGAGAACAGAATAAGCTATTTGAAAGTGCCCTTGCCATACATGACAAGGACACCCCAGACCGATGGCTAAAGGTTGCAGCTATGATTCCTGGGAAGACTGTGTATGATGTGATCAAGCAGTACAGGGAATTATTAGAAGATGTTAGTGAAATAGAGGCAGGGAGGGTTCCAATTCCTGGATATCTTACCTCTTCCTTCACGTTTGAGTTGGTTGATCATCACAATTATGACGCATATAGAAAGAGGCCTGCAGCAGCTAGGGGTTCTGAACAAGAGAGGAAGAAAGGGGTTCCATGGACAGAAGAGGAACACAGGCGTTTTCTGATGGGACTTTTGAAGTATGGTAAAGGGGACTGGAGAAATATCTCTCGTAATTTTGTAGTCACGAAGACTCCCACTCAAGTAGCAAGCCATGCTCAGAAGTACTATATAAGGCAGAATCTTTCTGGGGTGAAAGAGAAGAGGAGACCCAGTATACATGATATTACTATTGTTAATCTTACAGAATCCACCTCAGAAGATAACAGCAAGCCCCTTGTGCTCAATGAGTCTCCTTTGCTCTCCCCACAGCACACGTCACCAAAAGTACAAGGCAATTGGAATCACCATAATGAGGGGAAACTGATGGCTTTGGACCAAAACAGTGACAATTTGTTCCTGTCATCTTCACTTGATATTTGCTTCAAAGGGCCTAAAACTGCAGGGGCAGGACCTCTACGACTGTCTCCATGGGGCTTATGCCAACCTCAAAGCTCAGGATTTCAGGAGTGCTTCTAGAGAGTTCAACCAGGCAGCTGCTTTTGGTATTCATGCATTGTAATGCCTTAACTCCATTATTGATGTTCAAAAACAAATCAATTCTCTACGCAGATCATTGCTCAGTATGATTATGCAGATGACCTGAGGCGGTACTTAGTTTTTGAACATCTCAAACAAAGAAACCCCAATAAATATTTCAATGCTTAACTGTAA	1044	0.4282	MFLQRFSLLLKDWFVQESHSTEWTREQNKLFESALAIHDKDTPDRWLKVAAMIPGKTVYDVIKQYRELLEDVSEIEAGRVPIPGYLTSSFTFELVDHHNYDAYRKRPAAARGSEQERKKGVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQNLSGVKEKRRPSIHDITIVNLTESTSEDNSKPLVLNESPLLSPQHTSPKVQGNWNHHNEGKLMALDQNSDNLFLSSSLDICFKGPKTAGAGPLRLSPWGLCQPQSSGFQECF	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach11g00975	282	ProSiteProfiles	Myb-like domain profile.	115	167	IPR001005	-
	Bach11g00975	282	FunFam	transcription factor MYB1R1	121	172	-	-
	Bach11g00975	282	CDD	SANT	22	69	IPR001005	-
	Bach11g00975	282	Gene3D	-	15	82	-	-
	Bach11g00975	282	FunFam	Transcription factor SRM1	15	82	-	-
	Bach11g00975	282	SUPERFAMILY	Homeodomain-like	21	75	IPR009057	-
	Bach11g00975	282	SUPERFAMILY	Homeodomain-like	116	171	IPR009057	-
	Bach11g00975	282	ProSiteProfiles	SANT domain profile.	18	73	IPR017884	-
	Bach11g00975	282	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	118	170	IPR006447	GO:0003677
	Bach11g00975	282	SMART	sant	19	71	IPR001005	-
	Bach11g00975	282	SMART	sant	119	169	IPR001005	-
	Bach11g00975	282	Pfam	Myb-like DNA-binding domain	122	166	IPR001005	-
	Bach11g00975	282	CDD	SANT	122	166	IPR001005	-
	Bach11g00975	282	PANTHER	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	16	229	IPR043363	-
	Bach11g00975	282	ProSiteProfiles	Myb-like domain profile.	23	69	IPR001005	-
	Bach11g00975	282	Gene3D	-	121	172	-	-
	Bach11g00975	282	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	115	171	IPR017930	-
	Bach11g00975	282	ProSiteProfiles	SANT domain profile.	123	171	IPR017884	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach11g00975	Bach-Chr11	8665091	8666922	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Bach11g00975		Myb_DNA-binding	1.1e-10	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach11g00975	-		-	gmx:778039	372.859