Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00963 TCTCCACCTTCTGAACTAGAGGAGGTTAAAGAGACGGCGCTGTTCCGCTGTCCGCCTTGACTGAGCCTGAGCTTCGTCTTGGCCCTCGACTTTGCTTTGCCTTCACTAACTTCATCTTCTTCTTTTTAATTACTCTAAATCTCTAAAACCCAAACATCATCAATGGCGGTGAAACCCTCAAAGGCCGAAAAGAAGATTGCTTACGATGCTAAGCTGTGCCAGCTTCTGGAAGAATACACCCAGATCCTCATTGTGGCAGCCGACAATGTTGGATCAAATCAACTTCAGAATATCCGAAGGGGTCTGCGTGGTGATTCAGTGGTTCTCATGGGTAAGAACACTATGATGAAACGCTCTGTCAGGATACACGCTGAGAAAACCGGCAACCAGGCCTTCCTCAACCTTATCCCCCTCCTTGTCGGCAACGTGGGATTGATCTTCACTAAAGGTGACTTGAAGGAGGTCAGGGAAGAGGTTGCCAAGTACAAGGTTGGAGCTCCTGCCCGTGTTGGTTTGGTTGCTCCGATTGATGTTGTTGTCCCTCCCGGCAACACAGGGCTTGACCCCTCTCAGACGTCTTTCTTCCAGGTGCTTAATATCCCCACCAAGATTAACAAGGGTACTGTCGAAATTATTACCCCTGTGGAACTAATTAGGAAGGGTGAAAAGGTGGGCTCTTCTGAGGCTGCTTTGCTTGCAAAGCTTGGGATTAGGCCCTTCTCATATGGGCTTGTGGTTCTGTCGGTCTATGATAATGGATCAGTGTTTAGCCCCGAGGTTCTTGATCTGACCGAGGATGACCTGATAGGGAAGTTTGCTGCTGGTGTCTCCATGGTGACTTCGCTTTCATTGGCCATCTCATACCCTACACTTGCTGCTGCCCCACATATGTTTATCAATGCCTACAAGAATGCCCTGGCTGTTGCAGTTGCTACTGAATATTCCTTCCCTCAGGCAGATGAGCTTAAGGAGTATCTAAAGGATCCAAGTAAATTTGCCGTAGCTGCTGTTGCCGCCCCTGCTGCTGATTCTGGCTCTGCTCCTGCTGCTGCTGCTGAGGAGGAGAAGAAGGAAGAACCCGCAGAAGAATCTGACGACGATATGGGTTTTAGCTTATTTGACTAA 1125 0.488 MAVKPSKAEKKIAYDAKLCQLLEEYTQILIVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGEKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFINAYKNALAVAVATEYSFPQADELKEYLKDPSKFAVAAVAAPAADSGSAPAAAAEEEKKEEPAEESDDDMGFSLFD 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00963 320 CDD Ribosomal_P0_L10e 9 185 - -
Bach11g00963 320 FunFam 60S acidic ribosomal protein P0 113 186 - -
Bach11g00963 320 MobiDBLite consensus disorder prediction 287 320 - -
Bach11g00963 320 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Bach11g00963 320 Gene3D - 6 209 IPR043141 -
Bach11g00963 320 Pfam 60s Acidic ribosomal protein 234 319 - -
Bach11g00963 320 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 303 - -
Bach11g00963 320 Pfam Ribosomal protein L10 7 108 IPR001790 -
Bach11g00963 320 PIRSF L10E 1 320 IPR030670 GO:0042254
Bach11g00963 320 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Bach11g00963 320 Gene3D - 114 185 IPR043164 -
Bach11g00963 320 MobiDBLite consensus disorder prediction 304 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00963 Bach-Chr11 8537629 8539714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00963 1 319 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 84.013 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00963 K02941 - qsa:O6P43_008964 543.502