Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00962 ATGGCGTCCAGCTTCCGCGATCGCACGTTGGAGTTTCGATCACTTTCCCAGACACTGAAGAAGATCGGAGGAGCACCACCACCTAATCAACCTGAAAACGCCCCATCTACATCCATACAATCTAGTCCAATATCCTCGTATTCTAGATCCGAATTCAACCGGCACGCCTCCCGGATCGGGCTCGGTATCCATGAAACCTCGCAGAAGATTGCGAGGCTTGCTCAATTGGCGAAGAAGTCATCAATTTTTAACGATCCCATTTTGGAAATACAAGAACTAACTGCTTTGATTAAGAATGACATCACATCATTAAATTCAGCTATTTCGGATTTGCAAACCATTCAAAACATGGAGATAGTTGATGGAAATTATTCAGAGGATAGAATTGTTCATTCAACTGCTGTTTTCGATGACTTAAAGAGCAAACTTATGGGGGCAACGAAGCAGCTTCAAGATGTGTTAACTACGAGGACAGAGAATATCAAGGCCCATGAGAATCGGAAGCAGATATTTTCTAAGAATGCATCAAGAGAGAACCCTTTTCAGCATCAGCCAAAGCCATTGACTGAGCCACCCCCTTGGTCAAATTCATCAAATCTATCTGAAAGTTTGCACCAAACATCACCGTTACCATCAAATGGAGTTCCGGTGGGTAGTCAACTAAGACGAAGGTTAGCTGTGGATAACACTCCATCTCAGCAAATGGAAATGTCTATGGTACAACAGGTTGTTCCACGACAGGAACATTATACCCAAAGCCGGGCAACTGCTCTGCATAATGTGGAATCTACTATCACAGAACTTAGTGGGATCTTCTCACATTTGGCTACAATGGTTGCCCAACAAGGGGAACTAGCTATCAGGATTGATGACAACATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAGGCATCTCAACCAAATTTCATCAAATAGGTGGCTTCTAATCAAGATATTTGCGATTCTGATACTTTTTCTGATGATCTTCATATTCTTTGTGGCCTAGAATTCCTTGCTGTAAACCTAATCACATAAGTCTTGCTTCATGGCTCATGTGACCAATAAGTACTGTTTGCAAGTAGAGAGGACACATTTACCTGTAAATTTCTGCTTTTTTGTGTTGTTAGGCAAGAGTCCAAATAGATGTTTTCAGAAACTTCTGTAGCATACATATGAACAGCAAAACTGTCAGGGGTTTGATGCAGATTAAGTATGCAGAGGTAGAATTATTTTACTGCTTGGTAAATTGAACAATCACAATATTCTTGTGAAAGGTGAGGATGATTGTATTTTGTGGCATGGATTGGTACATTGATGTAGTTTAAGTAAGTCTTGG 1353 0.4102 MASSFRDRTLEFRSLSQTLKKIGGAPPPNQPENAPSTSIQSSPISSYSRSEFNRHASRIGLGIHETSQKIARLAQLAKKSSIFNDPILEIQELTALIKNDITSLNSAISDLQTIQNMEIVDGNYSEDRIVHSTAVFDDLKSKLMGATKQLQDVLTTRTENIKAHENRKQIFSKNASRENPFQHQPKPLTEPPPWSNSSNLSESLHQTSPLPSNGVPVGSQLRRRLAVDNTPSQQMEMSMVQQVVPRQEHYTQSRATALHNVESTITELSGIFSHLATMVAQQGELAIRIDDNMDESLANVEGAHSSLLRHLNQISSNRWLLIKIFAILILFLMIFIFFVA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00962 340 Pfam SNARE domain 285 336 IPR000727 -
Bach11g00962 340 MobiDBLite consensus disorder prediction 193 215 - -
Bach11g00962 340 MobiDBLite consensus disorder prediction 20 47 - -
Bach11g00962 340 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 3 21 IPR021538 -
Bach11g00962 340 CDD SNARE_syntaxin5 252 336 - -
Bach11g00962 340 PANTHER SYNTAXIN 50 334 IPR045242 -
Bach11g00962 340 SMART tSNARE_6 243 310 IPR000727 -
Bach11g00962 340 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 248 310 IPR000727 -
Bach11g00962 340 MobiDBLite consensus disorder prediction 164 218 - -
Bach11g00962 340 SUPERFAMILY t-snare proteins 48 303 IPR010989 GO:0016020|GO:0016192
Bach11g00962 340 Gene3D - 46 303 - -
Bach11g00962 340 ProSitePatterns Syntaxin / epimorphin family signature. 254 293 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00962 Bach-Chr11 8532960 8537157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00962 1 340 SNARE and Associated Proteins AT5G05760 68.035 2.77e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00962 K08490 - qsa:O6P43_013881 514.998