Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00945 ATGCCAGCCCAGAAGCGCTCGCACGAGGCTACAGAGGAGGGTGCTATGGGAACCGAGAAGAAGGATAATGAGCATCCAGAAGATGAATTGGAATCCGATCGAAGCTCTACGTGGAACAACGGGGACAAAGAAGAATATGTTGTTATCAAATTATCAGATGTACGCAAGGAAGTTCAATGCCCCATCTGTCTAGGCATCATTCGGAAAACAAGAACTGTTATGGAATGCCTGCATCGCTTTTGCAGAGAATGCATAGATAAATCTATGAGACTTGGTAACAACGAATGTCCTGCTTGCCGCACACACTGTGCTAGTAGACGCTCCCTGAGAGATGATCCTAACTATGATGCCTTAATTGCTGCTCTCTATCCAGATATAGACAAGTATGAGGCGGAGGAATATGCATTACATGAGGATGAGAGGGCTCGAAATAAGCAGATCCAAGCTTCTATTGCCCAAATTCTTCGACGACAAACGGAAGCACTGAGTAAGAAGCGTAATGCCAAACCCACAACAGTGGCTTTTGTGAGGAGGACACAGGGTACCTATCGAACTTCACATCCAAGGGGTAGAAGAAGAACTGCAGTTAACCTTGAAGGATTTTCTGACAGTGATGATACAAATGATAATGATGGGAGCAAGGGTCCATCTTCAGGTGATGAGCAGACAGAAACCAAGCACAAAAGAAGCAAGAGAGGAGAAGTACAATTTTCTCAGAATGCTGCTGCCACTGGTGCAGAGGGAGCTGGTGAGGAAAATGTTTCTGAAGCAAATAGAGAACTCATGGGTTCATCAGGTACACTTGCCTGGGGGAAAAATGGCCAGCGGAGTCACAACCGAATCAATGGTAAGAATTCCAGAAACAGTCGCATCTCCAAATTGGTTGATCATCTCCGTAACTCAAATGAAACTAATGATGAGTTGGGTATCCATCTCATGCTTGTCTCTTTTGATGAGCAAAGAATACCAAGTTTGCAGCAGCCGTACCTTTGCTGCAGGCCTACATTATCAGTCAGACACCTACGCCAGTATGTTGCACGTCAAACTGCACTGCAGGCTGATGAAGTTGAATTAAGCTTGGTAAAAGAGCAGCAATCCAATGTTATAAGAGCTGCAGGCAGCCTAAATCCATGCAAAGATAAGTTGCAAGTTCTAGAAGAGCAAGAAACTTTGGCTGAACTGGAAACCGATAATCTCAGCTGCGGCTATCTGCTTATGATGTATAAGAGGAAATTGTGGAACTCAAACGAAGTTGATCTGAGGTGA 1266 0.4471 MPAQKRSHEATEEGAMGTEKKDNEHPEDELESDRSSTWNNGDKEEYVVIKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEAEEYALHEDERARNKQIQASIAQILRRQTEALSKKRNAKPTTVAFVRRTQGTYRTSHPRGRRRTAVNLEGFSDSDDTNDNDGSKGPSSGDEQTETKHKRSKRGEVQFSQNAAATGAEGAGEENVSEANRELMGSSGTLAWGKNGQRSHNRINGKNSRNSRISKLVDHLRNSNETNDELGIHLMLVSFDEQRIPSLQQPYLCCRPTLSVRHLRQYVARQTALQADEVELSLVKEQQSNVIRAAGSLNPCKDKLQVLEEQETLAELETDNLSCGYLLMMYKRKLWNSNEVDLR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00945 421 ProSiteProfiles Zinc finger RING-type profile. 60 100 IPR001841 -
Bach11g00945 421 ProSitePatterns Zinc finger RING-type signature. 76 85 IPR017907 -
Bach11g00945 421 MobiDBLite consensus disorder prediction 1 38 - -
Bach11g00945 421 MobiDBLite consensus disorder prediction 220 234 - -
Bach11g00945 421 CDD RING-HC_RING1-like 57 122 - -
Bach11g00945 421 PANTHER OS11G0578200 PROTEIN 12 411 IPR044592 -
Bach11g00945 421 MobiDBLite consensus disorder prediction 258 288 - -
Bach11g00945 421 SUPERFAMILY RING/U-box 45 131 - -
Bach11g00945 421 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 130 IPR013083 -
Bach11g00945 421 SMART ring_2 60 99 IPR001841 -
Bach11g00945 421 MobiDBLite consensus disorder prediction 161 288 - -
Bach11g00945 421 Pfam Zinc finger, C3HC4 type (RING finger) 59 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00945 Bach-Chr11 8393119 8397651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00945 53 123 C3H Transcription Factor Family AT3G23060 33.784 1.46e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00945 K10695 - zju:107425269 517.309